RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GLO1Q04760 184 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 SCGB2A2Q13296 93 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 AQP6Q13520 282 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 KRR1Q13601 381 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 TMEM155Q4W5P6 130 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 CCDC92Q53HC0 331 aaPredicted RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 FBXW12Q6X9E4 464 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 PTCHD4Q6ZW05 846 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 CYP4Z1Q86W10 505 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 LRRC28Q86X40 367 aaPredicted RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 GLB1L2Q8IW92 636 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 FAM86B1Q8N7N1 296 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 ICA1LQ8NDH6 482 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 OR4M2Q8NGB6 313 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 CCL17Q92583 94 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 DVL3Q92997 716 aaPredicted RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 PTP4A1Q93096 173 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 FAM46AQ96IP4 442 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 COG8Q96MW5 612 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 DCLRE1CQ96SD1 692 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 KCTD14Q9BQ13 255 aaPredicted RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 SYT4Q9H2B2 425 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 LPAR2Q9HBW0 351 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 MSL2Q9HCI7 577 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 SPAG4Q9NPE6 437 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 CD300AQ9UGN4 299 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 PURGQ9UJV8 347 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 RPS6KA6Q9UK32 745 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 NPTNQ9Y639 398 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 MGAM2Q2M2H8 2515 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 LOC105371242A0A075B767 164 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 IGLV1-36A0A0B4J1U3 117 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 A0A1W2PPL8 197 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 A8MXK9 166 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 F5H0A9 414 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 DCTN6O00399 190 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 GSTA4O15217 222 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC16A7O60669 478 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 ABHD16AO95870 558 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 HSD17B1P14061 328 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 NCK1P16333 377 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 ADRA2CP18825 462 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 GSTM3P21266 225 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 EPHA1P21709 976 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC6A9P48067 706 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 RGS6P49758 472 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 NUDT2P50583 147 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 HMGA2P52926 109 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 TNFAIP6P98066 277 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 PAX2Q02962 417 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 COX10Q12887 443 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 RFX4Q33E94 735 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 GLYATQ6IB77 296 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 PGM2L1Q6PCE3 622 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 RRM2BQ7LG56 351 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 ZBTB46Q86UZ6 589 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 DEFB108BQ8NET1 73 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 OR1F12Q8NHA8 337 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 NANPQ8TBE9 248 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 DACT3Q96B18 629 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 RASD2Q96D21 266 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 CMBLQ96DG6 245 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 CMTM5Q96DZ9 223 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF570Q96NI8 536 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 DDOQ99489 341 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 NUAK2Q9H093 628 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 PATZ1Q9HBE1 687 aaKnown RBP7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 TMEM106BQ9NUM4 274 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 DCAF16Q9NXF7 216 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 PLEK2Q9NYT0 353 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 IL19Q9UHD0 177 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 PCDHB10Q9UN67 800 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 SAMD4AQ9UPU9 718 aaKnown RBP7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 COA3Q9Y2R0 106 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 LHFPL6Q9Y693 200 aa7.06□□□□□ -1.28
SMARCB1-207ENST00000491967 UNC119BA6NIH7 251 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 TRAPPC2LH3BP13 241 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 IFNL4K9M1U5 179 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 RER1O15258 196 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ATP8B1O43520 1251 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 IDH3BO43837 385 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 SNX3O60493 162 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 DOK2O60496 412 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 FOXH1O75593 365 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 PPP1R3DO95685 299 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 TNFRSF1AP19438 455 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 FPR3P25089 353 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 CRABP1P29762 137 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 GGT2P36268 569 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 HTR5AP47898 357 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 GSSP48637 474 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ERFP50548 548 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 SMIM11AP58511 58 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ZMYND11Q15326 602 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF181Q2M3W8 571 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 SPATS1Q496A3 300 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF362Q5T0B9 420 aaPredicted RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 DCAF12L2Q5VW00 463 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 C1orf94Q6P1W5 598 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms