RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ALG12Q9BV10 488 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 JAM3Q9BX67 310 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 NUAK2Q9H093 628 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 RBM38Q9H0Z9 239 aaKnown RBP6.65□□□□□ -1.34
CLDN1-202ENST00000490800 OPN3Q9H1Y3 402 aaPredicted RBP6.65□□□□□ -1.34
CLDN1-202ENST00000490800 SYT4Q9H2B2 425 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 ADGRL4Q9HBW9 690 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 KLHL13Q9P2N7 655 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 MOKQ9UQ07 419 aa6.65□□□□□ -1.34
CLDN1-202ENST00000490800 LSM2Q9Y333 95 aaKnown RBP6.65□□□□□ -1.34
CLDN1-202ENST00000490800 EXOSC1Q9Y3B2 195 aaKnown RBP6.65□□□□□ -1.34
CLDN1-202ENST00000490800 C2CD3Q4AC94 2353 aa6.65□□□□□ -1.35
CLDN1-202ENST00000490800 DOCK7Q96N67 2140 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 IGLV1-36A0A0B4J1U3 117 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 SMIM31A0A1B0GVY4 71 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 H3BSA7 217 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 AHCYL1O43865 530 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 AQP8O94778 261 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 VAMP5O95183 116 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 GOSR1O95249 250 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 TFP02787 698 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 MRPL3P09001 348 aaKnown RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 SBK2P0C263 348 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 LIMS3P0CW19 117 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 LIMS4P0CW20 117 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 CTLA4P16410 223 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF43P17038 809 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 MYL12AP19105 171 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 CD53P19397 219 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 PSMB9P28065 219 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ATP6V1E1P36543 226 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 NAA10P41227 235 aaPredicted RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 RPS3AP61247 264 aaKnown RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 SLC17A1Q14916 467 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ABLIM2Q6H8Q1 611 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 CREB3L2Q70SY1 520 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF367Q7RTV3 350 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ZBTB46Q86UZ6 589 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ZIC4Q8N9L1 334 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 POMGNT2Q8NAT1 580 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 SYT14Q8NB59 555 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 WFDC11Q8NEX6 87 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 PROKR2Q8NFJ6 384 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 OR10H4Q8NGA5 316 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 OR6K6Q8NGW6 343 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 OR2T4Q8NH00 348 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 OR6X1Q8NH79 312 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 SMAP2Q8WU79 429 aaPredicted RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ROBO4Q8WZ75 1007 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 CPNE4Q96A23 557 aaPredicted RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 NMD3Q96D46 503 aaKnown RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 CNN2Q99439 309 aaKnown RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 EMC6Q9BV81 110 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 SF3B5Q9BWJ5 86 aaKnown RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 MRPL13Q9BYD1 178 aaKnown RBP6.64□□□□□ -1.35
CLDN1-202ENST00000490800 PRRG4Q9BZD6 226 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 FAM192AQ9GZU8 254 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 RNF122Q9H9V4 155 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 TIGARQ9NQ88 270 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ERVK13-1Q9NX77 482 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ELOVL5Q9NYP7 299 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 NDUFA13Q9P0J0 144 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 PROCRQ9UNN8 238 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 B9D1Q9UPM9 204 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ERGIC3Q9Y282 383 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF175Q9Y473 711 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 FKBP7Q9Y680 259 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 CEPT1Q9Y6K0 416 aa6.64□□□□□ -1.35
CLDN1-202ENST00000490800 IGKV1D-43A0A0B4J1Z2 117 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TMEM129A0AVI4 362 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TVP23AA6NH52 213 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF726A6NNF4 738 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF716A6NP11 495 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 C12orf71A8MTZ7 269 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 DEFB108AA8MXU0 73 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 C16orf97H3BN30 126 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 SELENOFO60613 162 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 SLC16A7O60669 478 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CYTIPO60759 359 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 GPANK1O95872 356 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 IGHG1P01857 330 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 SCG5P05408 212 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 PGA4P0DJD7 388 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 PGA3P0DJD8 388 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CD8BP10966 210 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CRABP1P29762 137 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TTKP33981 857 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 UGT2B10P36537 528 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 HCCSP53701 268 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CLDN17P56750 224 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 NKX6-1P78426 367 aaPredicted RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF85Q03923 595 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 FMODQ06828 376 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CAMK2DQ13557 499 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ETFDHQ16134 617 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TIGD6Q17RP2 521 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 FCRLAQ7L513 359 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 SLC16A9Q7RTY1 509 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 HDDC2Q7Z4H3 204 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 LHFPL3Q86UP9 236 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms