RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 IMPA2O14732 288 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 KHDRBS3O75525 346 aaKnown RBP17.73■□□□□ 0.43
SYNE4-205ENST00000490730 SDHAP31040 664 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 MDH1P40925 334 aaKnown RBP17.73■□□□□ 0.43
SYNE4-205ENST00000490730 CENPAP49450 140 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 PSME3P61289 254 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 GPR139Q6DWJ6 353 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 HACD2Q6Y1H2 254 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-205ENST00000490730 GLB1L2Q8IW92 636 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 BPIFB2Q8N4F0 458 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 SLC6A7Q99884 636 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 TMEM106BQ9NUM4 274 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 SIGLEC7Q9Y286 467 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 IER3IP1Q9Y5U9 82 aa17.73■□□□□ 0.43
SYNE4-205ENST00000490730 A0A1W2PRQ8 180 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 TRIM77I1YAP6 450 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 DIRAS1O95057 198 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 TNFRSF1AP19438 455 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 HILS1P60008 231 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 DGCR6Q14129 220 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 Q6ZR03 302 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 OR5AS1Q8N127 324 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 OR52J3Q8NH60 311 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 OR1F12Q8NHA8 337 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 JMJD8Q96S16 334 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 SUCNR1Q9BXA5 334 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 KRCC1Q9NPI7 259 aaPredicted RBP17.72■□□□□ 0.43
SYNE4-205ENST00000490730 NRIP3Q9NQ35 241 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 NDUFAF4Q9P032 175 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 V9GYQ6 96 aa17.72■□□□□ 0.43
SYNE4-205ENST00000490730 TRBV4-1A0A0J9YWV2 114 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 UNC119BA6NIH7 251 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 PTP4A3O75365 173 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 GMNNO75496 209 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 IGHV2-70P01814 119 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 RHCEP18577 417 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 KITLGP21583 273 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 TUBG1P23258 451 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 GATA3P23771 443 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 LIMS1P48059 325 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 ERFP50548 548 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 KRT72Q14CN4 511 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 PTCHD4Q6ZW05 846 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 USP43Q70EL4 1123 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 ADCK1Q86TW2 530 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 ITLN1Q8WWA0 313 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 C22orf15Q8WYQ4 148 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 GCDHQ92947 438 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-205ENST00000490730 SAMD8Q96LT4 415 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 NUAK2Q9H093 628 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 TUBG2Q9NRH3 451 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 ADA2Q9NZK5 511 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 VSX1Q9NZR4 365 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-205ENST00000490730 ABCD2Q9UBJ2 740 aa17.71■□□□□ 0.43
SYNE4-205ENST00000490730 OR6C6A6NF89 314 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 RER1O15258 196 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 FOXH1O75593 365 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 GPANK1O95872 356 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 DBHP09172 617 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 ZFP36P26651 326 aaKnown RBP17.7■□□□□ 0.42
SYNE4-205ENST00000490730 CFPP27918 469 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 OMPP47874 163 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 RPS6KA3P51812 740 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 LSM6P62312 80 aaKnown RBP17.7■□□□□ 0.42
SYNE4-205ENST00000490730 HLXQ14774 488 aaPredicted RBP17.7■□□□□ 0.42
SYNE4-205ENST00000490730 SEC23BQ15437 767 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 GLYATQ6IB77 296 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 KLHL36Q8N4N3 616 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 SPICQ8N5J4 248 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 RNF148Q8N7C7 305 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 FAM86B1Q8N7N1 296 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 CMTM5Q96DZ9 223 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 COG8Q96MW5 612 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 GPX7Q96SL4 187 aaPredicted RBP17.7■□□□□ 0.42
SYNE4-205ENST00000490730 SPAG4Q9NPE6 437 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 PTTG3PQ9NZH4 202 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 OPN4Q9UHM6 478 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 SAMD4AQ9UPU9 718 aaKnown RBP17.7■□□□□ 0.42
SYNE4-205ENST00000490730 PPP1R3CQ9UQK1 317 aa17.7■□□□□ 0.42
SYNE4-205ENST00000490730 SURF4O15260 269 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 PPP1R3DO95685 299 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 BTG1P62324 171 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 MEP1BQ16820 701 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 CCDC92Q53HC0 331 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-205ENST00000490730 DPY19L2P2Q6ZN68 376 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 ATG16L2Q8NAA4 619 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 FAM216AQ8WUB2 273 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 PTP4A1Q93096 173 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 HAVCR1Q96D42 359 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 TSSK2Q96PF2 358 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 OR2V2Q96R30 315 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 ELAC2Q9BQ52 826 aaKnown RBP17.69■□□□□ 0.42
SYNE4-205ENST00000490730 RBM4Q9BWF3 364 aaKnown RBP17.69■□□□□ 0.42
SYNE4-205ENST00000490730 MED4Q9NPJ6 270 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 IL19Q9UHD0 177 aa17.69■□□□□ 0.42
SYNE4-205ENST00000490730 CDKN2AP42771 156 aaKnown RBP17.68■□□□□ 0.42
SYNE4-205ENST00000490730 RGS6P49758 472 aa17.68■□□□□ 0.42
SYNE4-205ENST00000490730 FXYD6P3P58550 94 aa17.68■□□□□ 0.42
SYNE4-205ENST00000490730 ZMYND11Q15326 602 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms