RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 LINC01560Q8TB33 94 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 ACMSDQ8TDX5 336 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 EEF1AKMT3Q96AZ1 226 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 GALNT14Q96FL9 552 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 DOK1Q99704 481 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 MICU1Q9BPX6 476 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 PKIBQ9C010 78 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 ILKAPQ9H0C8 392 aaPredicted RBP2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 ANKRA2Q9H9E1 313 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 UXTQ9UBK9 157 aaPredicted RBP2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 HPCAL4Q9UM19 191 aa2.33□□□□□ -2.04
PRPF4B-207ENST00000490399 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 IGLV3-12A0A075B6K2 115 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 BPY2O14599 106 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 EIF3HO15372 352 aaKnown RBP eCLIP2.32□□□□□ -2.042e-9■□□□□ 11.2
PRPF4B-207ENST00000490399 RNF13O43567 381 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 FKBP6O75344 327 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 OR8U9P0C7N5 309 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 PABPC4LP0CB38 370 aaKnown RBP2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 C1GALT1C1LP0DN25 315 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 FOXN2P32314 431 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 CXCL12P48061 93 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 HCAR3P49019 387 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 CDH6P55285 790 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 XKR7Q5GH72 579 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 PRR9Q5T870 116 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 PRAMEF20Q5VT98 475 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 GPR107Q5VW38 600 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 TMEM150AQ86TG1 271 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 OR56B2PQ8NGI1 322 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 PHF10Q8WUB8 498 aaKnown RBP2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 ECHDC3Q96DC8 303 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 COL21A1Q96P44 957 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 FBXO6Q9NRD1 293 aaPredicted RBP2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 HRASLS2Q9NWW9 162 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
PRPF4B-207ENST00000490399 A0A1B0GW55 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 OR6C74A6NCV1 312 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 FAM47DPA6NHR8 397 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 A8MUU9 505 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 H0YJW9 148 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 IGHDP01880 384 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 IL4P05112 153 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DUX4L2P0CJ85 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DUX4L3P0CJ86 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DUX4L5P0CJ88 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DUX4L6P0CJ89 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DUX4L7P0CJ90 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 RAB3AP20336 220 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 P2RX1P51575 399 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 VSX2P58304 361 aaPredicted RBP2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 STXBP1P61764 594 aaKnown RBP2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 PPP1CBP62140 327 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 IFT88Q13099 833 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 PIGHQ14442 188 aaPredicted RBP2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 C12orf54Q6X4T0 127 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 SLC16A13Q7RTY0 426 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 CDKL3Q8IVW4 592 aaPredicted RBP2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 LILRB4Q8NHJ6 448 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 ELMO1Q92556 727 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 PTX4Q96A99 478 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 TPD52L3Q96J77 140 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DNAJC1Q96KC8 554 aaKnown RBP2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 RNF157Q96PX1 679 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 NUP58Q9BVL2 599 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 OSBPL11Q9BXB4 747 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 FGF23Q9GZV9 251 aaPredicted RBP2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 DUX4Q9UBX2 424 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 VANGL2Q9ULK5 521 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 HYOU1Q9Y4L1 999 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 S4R3C0 116 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 SEC16AO15027 2179 aa2.31□□□□□ -2.04
PRPF4B-207ENST00000490399 SYNJ2BP-COX16A0A087WUM0 186 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 IGHV1OR15-9A0A0B4J2B8 117 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 XKRY2A2RUG3 117 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 GOLGA8OA6NCC3 632 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 OR2AG2A6NM03 316 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 ZNF716A6NP11 495 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 GOLGA8NF8WBI6 632 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 SMKR1H3BMG3 65 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 H7C417 338 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 LSM1O15116 133 aaKnown RBP2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 NVLO15381 856 aaKnown RBP2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 SOCS1O15524 211 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 CDRT1O95170 752 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 ZNF735P0CB33 412 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 EIF3EP60228 445 aaKnown RBP2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 TGM3Q08188 693 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 SELENBP1Q13228 472 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 C9orf135Q5VTT2 229 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 REEP3Q6NUK4 255 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 CERS6Q6ZMG9 384 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 TAS2R42Q7RTR8 314 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 BHLHA15Q7RTS1 189 aaPredicted RBP2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 SNX20Q7Z614 316 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 COX18Q8N8Q8 333 aa2.3□□□□□ -2.04
PRPF4B-207ENST00000490399 OR7G2Q8NG99 324 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms