RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 OR7A5Q15622 319 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 MPV17L2Q567V2 206 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 AP1ARQ63HQ0 302 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 TBC1D21Q8IYX1 336 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 TMEM105Q8N8V8 129 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 PRELID2Q8N945 189 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 OR2A1Q8NGT9 310 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 CCDC126Q96EE4 140 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 SLC29A1Q99808 456 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 GCOM2Q9BZD3 368 aaPredicted RBP2.32□□□□□ -2.04
CCDC39-206ENST00000489868 OR51M1Q9H341 326 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 EDA2RQ9HAV5 297 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 TMEM9BQ9NQ34 198 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 HYOU1Q9Y4L1 999 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 IGKV3D-11A0A0A0MRZ8 115 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 LRRIQ3A6PVS8 624 aaPredicted RBP2.31□□□□□ -2.04
CCDC39-206ENST00000489868 RAB29O14966 203 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 IGKV1D-16P01601 117 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 HCAR3P49019 387 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 CDKN2DP55273 166 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 PRR3P79522 188 aaKnown RBP2.31□□□□□ -2.04
CCDC39-206ENST00000489868 VPS26BQ4G0F5 336 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 PRAMEF5Q5TYX0 476 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 PRAMEF6Q5VXH4 476 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 RUFY3Q7L099 469 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 SNX20Q7Z614 316 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 TMEM256Q8N2U0 113 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 LRRC29Q8WV35 223 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 KIFAP3Q92845 792 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 TBL1YQ9BQ87 522 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 C1orf198Q9H425 327 aa2.31□□□□□ -2.04
CCDC39-206ENST00000489868 DHX35Q9H5Z1 703 aaKnown RBP2.31□□□□□ -2.04
CCDC39-206ENST00000489868 PSMC3IPQ9P2W1 217 aaPredicted RBP2.31□□□□□ -2.04
CCDC39-206ENST00000489868 DHCR7Q9UBM7 475 aaKnown RBP2.31□□□□□ -2.04
CCDC39-206ENST00000489868 CARHSP1Q9Y2V2 147 aaKnown RBP2.31□□□□□ -2.04
CCDC39-206ENST00000489868 SHROOM3Q8TF72 1996 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 IGHV3OR16-8A0A075B7F1 116 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 IGKV1-8A0A0C4DH67 115 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 GGT1P19440 569 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 RAB3AP20336 220 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 CHMLP26374 656 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 P2RX1P51575 399 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 PPP1CBP62140 327 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 IL15RAQ13261 267 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 RNASEKQ6P5S7 137 aaKnown RBP2.3□□□□□ -2.04
CCDC39-206ENST00000489868 NBPF5PQ86XG9 351 aaPredicted RBP2.3□□□□□ -2.04
CCDC39-206ENST00000489868 NPWQ8N729 165 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 C11orf72Q8NBR9 251 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 OR9A2Q8NGT5 310 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 COL21A1Q96P44 957 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 RBBP8Q99708 897 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 HSD17B10Q99714 261 aaKnown RBP2.3□□□□□ -2.04
CCDC39-206ENST00000489868 RACGAP1Q9H0H5 632 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 LHX5Q9H2C1 402 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 TRMT112Q9UI30 125 aaKnown RBP2.3□□□□□ -2.04
CCDC39-206ENST00000489868 ASB3Q9Y575 518 aa2.3□□□□□ -2.04
CCDC39-206ENST00000489868 SEC16AO15027 2179 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 OR6C74A6NCV1 312 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 H7C417 338 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 KLHL41O60662 606 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 RDH16O75452 317 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 ANXA5P08758 320 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 ACSM4P0C7M7 580 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 ZNF688P0C7X2 276 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 ME2P23368 584 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 CCNA1P78396 465 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 ADARB1P78563 741 aaKnown RBP2.29□□□□□ -2.04
CCDC39-206ENST00000489868 ZMYND11Q15326 602 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 SPIN3Q5JUX0 258 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 GPR107Q5VW38 600 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 GUSBP11Q6P575 273 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 COX18Q8N8Q8 333 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 SPATA4Q8NEY3 305 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 SAMD10Q9BYL1 202 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 METTL7AQ9H8H3 244 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 MTFP1Q9UDX5 166 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 CBY1Q9Y3M2 126 aa2.29□□□□□ -2.04
CCDC39-206ENST00000489868 TSPOAP1O95153 1857 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 TRIOBPQ9H2D6 2365 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 PALLDQ8WX93 1383 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 NVLO15381 856 aaKnown RBP2.28□□□□□ -2.04
CCDC39-206ENST00000489868 PALMO75781 387 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 P0C880 135 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 IL1RNP18510 177 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 NCF2P19878 526 aaPredicted RBP2.28□□□□□ -2.04
CCDC39-206ENST00000489868 GDI2P50395 445 aaKnown RBP2.28□□□□□ -2.04
CCDC39-206ENST00000489868 CCNG1P51959 295 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 GFERP55789 205 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 TMEM107Q6UX40 140 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 UBE2J2Q8N2K1 259 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 TTLQ8NG68 377 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 OR1P1Q8NH06 330 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 MICU1Q9BPX6 476 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 NT5C3AQ9H0P0 336 aa2.28□□□□□ -2.04
CCDC39-206ENST00000489868 KRBOX1C9JBD0 128 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 K7EMT4 169 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms