RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 EIF4EBP3O60516 100 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TBX19O60806 448 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR32O75388 356 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF821O75541 412 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 NXPH2O95156 264 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 WNT11O96014 354 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 CST4P01036 141 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 HLA-AP01891 365 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 RPLP2P05387 115 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 QDPRP09417 244 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR8U9P0C7N5 309 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2T7P0C7T2 308 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TRGC1P0CF51 173 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 NR2F1P10589 423 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ACRV1P26436 265 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 CD82P27701 267 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 CHATP28329 748 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 AKT2P31751 481 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 RGRP47804 291 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 IDH3GP51553 393 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 HMGCS2P54868 508 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 CLDN12P56749 244 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TAS2R38P59533 333 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TAS2R50P59544 299 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 RPS13P62277 151 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ACTA2P62736 377 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ACTG2P63267 376 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM3AP98173 230 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 LTBQ06643 244 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 HERPUD1Q15011 391 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ELOBQ15370 118 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 C1orf194Q5T5A4 169 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 CST9Q5W186 159 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF774Q6NX45 483 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PRSS54Q6PEW0 395 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 DEGS2Q6QHC5 323 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 GDPD4Q6W3E5 623 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 Q6ZRG5 221 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 COMMD6Q7Z4G1 85 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM183AQ8IXX5 376 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 KLHDC8AQ8IYD2 350 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 LMNTD1Q8N9Z9 388 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZSCAN4Q8NAM6 433 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 MFSD9Q8NBP5 474 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF248Q8NDW4 579 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR1N1Q8NGS0 311 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR13C2Q8NGS9 318 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2T27Q8NH04 317 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR8S1Q8NH09 359 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR8U1Q8NH10 309 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 OR4C6Q8NH72 309 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 SCAMP5Q8TAC9 235 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 SMPDL3AQ92484 453 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 MOAP1Q96BY2 351 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PELI1Q96FA3 418 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PPP1R16AQ96I34 528 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 Q96M66 194 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 WFIKKN1Q96NZ8 548 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 URM1Q9BTM9 101 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PBDC1Q9BVG4 233 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR174Q9BXC1 333 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 EIF5A2Q9GZV4 153 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ATG10Q9H0Y0 220 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 MED20Q9H944 212 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 SYNPO2LQ9H987 977 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PLEKHA2Q9HB19 425 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 GOLGA2P5Q9HBQ8 144 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ADGRL4Q9HBW9 690 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC17A5Q9NRA2 495 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 CMC2Q9NRP2 79 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 P2RX2Q9UBL9 471 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 GNG8Q9UK08 70 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 FBXO4Q9UKT5 387 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 SCML2Q9UQR0 700 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF281Q9Y2X9 895 aa4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PCYT1BQ9Y5K3 369 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-206ENST00000489853 PIKFYVEQ9Y2I7 2098 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 BRCA2P51587 3418 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TRAV18A0A075B6X5 111 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 DUXAA6NLW8 204 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PRR33A8MZF0 331 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PRAMEF26H0Y7S4 382 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 H0YIZ8 118 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TCF21O43680 179 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SRPX2O60687 465 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 LEFTY1O75610 366 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 DUS4LO95620 317 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GPANK1O95872 356 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 EPPINO95925 133 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 IGSF6O95976 241 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TRGC2P03986 189 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 OPN1LWP04000 364 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GAPDHP04406 335 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 AMY2AP04746 511 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GALTP07902 379 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CXCL1P09341 107 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF735P0CB33 412 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ST6GAL1P15907 406 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms