RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 OR6K3Q8NGY3 331 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 FBXO17Q96EF6 278 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 C4orf45Q96LM5 186 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 SH3GL3Q99963 347 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 PDCD1LG2Q9BQ51 273 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 DCSTAMPQ9H295 470 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 FRRS1LQ9P0K9 344 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 FBXL3Q9UKT7 428 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 FAM215AQ9Y5M1 114 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 R4GMQ9 66 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 HOXD4P09016 255 aaPredicted RBP19.01■□□□□ 0.63
SMC4-221ENST00000489573 SFTPCP11686 197 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 DCTDP32321 178 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 KIR2DL2P43627 348 aaPredicted RBP19.01■□□□□ 0.63
SMC4-221ENST00000489573 SERPINB10P48595 397 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 TAF13Q15543 124 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 ZNF829Q3KNS6 432 aaPredicted RBP19.01■□□□□ 0.63
SMC4-221ENST00000489573 C22orf42Q6IC83 251 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 GFRALQ6UXV0 394 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 SEM1Q6ZVN7 128 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 ZNF627Q7L945 461 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 CNEP1R1Q8N9A8 125 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 DCLRE1CQ96SD1 692 aaKnown RBP19.01■□□□□ 0.63
SMC4-221ENST00000489573 NIPAL2Q9H841 368 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 RALYQ9UKM9 306 aaKnown RBP19.01■□□□□ 0.63
SMC4-221ENST00000489573 GSTK1Q9Y2Q3 226 aa19.01■□□□□ 0.63
SMC4-221ENST00000489573 PHF3Q92576 2039 aaKnown RBP19■□□□□ 0.63
SMC4-221ENST00000489573 SRSF10O75494 262 aaKnown RBP19■□□□□ 0.63
SMC4-221ENST00000489573 ZFPL1O95159 310 aa19■□□□□ 0.63
SMC4-221ENST00000489573 SERPINA3P01011 423 aa19■□□□□ 0.63
SMC4-221ENST00000489573 CD8BP10966 210 aa19■□□□□ 0.63
SMC4-221ENST00000489573 MPGP29372 298 aa19■□□□□ 0.63
SMC4-221ENST00000489573 CCR9P51686 369 aa19■□□□□ 0.63
SMC4-221ENST00000489573 FOXG1P55316 489 aaPredicted RBP19■□□□□ 0.63
SMC4-221ENST00000489573 PER3P56645 1201 aa19■□□□□ 0.63
SMC4-221ENST00000489573 MFGE8Q08431 387 aaPredicted RBP19■□□□□ 0.63
SMC4-221ENST00000489573 SCRN3Q0VDG4 424 aa19■□□□□ 0.63
SMC4-221ENST00000489573 WDR38Q5JTN6 314 aa19■□□□□ 0.63
SMC4-221ENST00000489573 C9orf135Q5VTT2 229 aa19■□□□□ 0.63
SMC4-221ENST00000489573 TMEM91Q6ZNR0 172 aa19■□□□□ 0.63
SMC4-221ENST00000489573 SLC16A14Q7RTX9 510 aa19■□□□□ 0.63
SMC4-221ENST00000489573 OR5AK2Q8NH90 309 aa19■□□□□ 0.63
SMC4-221ENST00000489573 ABHD4Q8TB40 342 aa19■□□□□ 0.63
SMC4-221ENST00000489573 KCNN2Q9H2S1 579 aa19■□□□□ 0.63
SMC4-221ENST00000489573 DDX28Q9NUL7 540 aaKnown RBP19■□□□□ 0.63
SMC4-221ENST00000489573 ZNF281Q9Y2X9 895 aa19■□□□□ 0.63
SMC4-221ENST00000489573 TMEM212A6NML5 194 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 OR4C45A6NMZ5 311 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 PRRG2O14669 202 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 PNPP00491 289 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 HSD11B1P28845 292 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 KIR3DL2P43630 455 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 SH3BGRP55822 239 aaPredicted RBP18.99■□□□□ 0.63
SMC4-221ENST00000489573 PCBD1P61457 104 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 GRB2P62993 217 aaKnown RBP18.99■□□□□ 0.63
SMC4-221ENST00000489573 EIF2S3LQ2VIR3 472 aaKnown RBP18.99■□□□□ 0.63
SMC4-221ENST00000489573 CCDC92Q53HC0 331 aaPredicted RBP18.99■□□□□ 0.63
SMC4-221ENST00000489573 SYT9Q86SS6 491 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 CATSPERDQ86XM0 798 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 PRSS35Q8N3Z0 413 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 DYNC2LI1Q8TCX1 351 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 CHD6Q8TD26 2715 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 KCTD7Q96MP8 289 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 WACQ9BTA9 647 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 COMMD4Q9H0A8 199 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 TP63Q9H3D4 680 aaPredicted RBP18.99■□□□□ 0.63
SMC4-221ENST00000489573 GTF2A1LQ9UNN4 478 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 DSPP15924 2871 aaKnown RBP18.99■□□□□ 0.63
SMC4-221ENST00000489573 MED12LQ86YW9 2145 aa18.99■□□□□ 0.63
SMC4-221ENST00000489573 LOC110117498-PIK3R3F6TDL0 507 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 CRHP06850 196 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 TUBA1BP68363 451 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 INSL4Q14641 139 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 YIF1BQ5BJH7 314 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 ELFN2Q5R3F8 820 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 VWA1Q6PCB0 445 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 TUBA1AQ71U36 451 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 SKA3Q8IX90 412 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 OR13C5Q8NGS8 318 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 ZFP3Q96NJ6 502 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 ATF6BQ99941 703 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 TMEM269A0A1B0GVZ9 245 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 SC5DO75845 299 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 CNOT4O95628 575 aaKnown RBP18.98■□□□□ 0.63
SMC4-221ENST00000489573 ZNF32P17041 273 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 MMP16P51512 607 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 PSMA6P60900 246 aaKnown RBP18.98■□□□□ 0.63
SMC4-221ENST00000489573 RPS11P62280 158 aaKnown RBP eCLIP18.98■□□□□ 0.638e-17■■■■■ 578.9
SMC4-221ENST00000489573 FOXF2Q12947 444 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 RAB35Q15286 201 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 ACSM3Q53FZ2 586 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 ZNF676Q8N7Q3 588 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 IL17RDQ8NFM7 739 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 FAM206AQ9NX38 181 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 GALNT8Q9NY28 637 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 PLEK2Q9NYT0 353 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 SLC5A6Q9Y289 635 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 ZNF835Q9Y2P0 537 aa18.98■□□□□ 0.63
SMC4-221ENST00000489573 SGCEO43556 437 aa18.97■□□□□ 0.63
SMC4-221ENST00000489573 TOXO94900 526 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms