RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 BLVRAP53004 296 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 KLF3P57682 345 aaPredicted RBP14.89□□□□□ -0.03
MDC1-206ENST00000489540 ERVS71-1P61550 626 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 GINS1Q14691 196 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 FAHD1Q6P587 224 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 ZDHHC13Q8IUH4 622 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 C10orf67Q8IYJ2 551 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 CIARTQ8N365 385 aaPredicted RBP14.89□□□□□ -0.03
MDC1-206ENST00000489540 IPCEF1Q8WWN9 437 aaPredicted RBP14.89□□□□□ -0.03
MDC1-206ENST00000489540 COG8Q96MW5 612 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 DCLRE1CQ96SD1 692 aaKnown RBP14.89□□□□□ -0.03
MDC1-206ENST00000489540 REG4Q9BYZ8 158 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 HDHD2Q9H0R4 259 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 TBCCD1Q9NVR7 557 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 CYB5R1Q9UHQ9 305 aa14.89□□□□□ -0.03
MDC1-206ENST00000489540 H3BSA7 217 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 ABHD16AO95870 558 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 FMO3P31513 532 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 GGT2P36268 569 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 ACTR3P61158 418 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 PPP1CBP62140 327 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 CDK5Q00535 292 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 DBPQ10586 325 aaPredicted RBP14.88□□□□□ -0.03
MDC1-206ENST00000489540 ELFN2Q5R3F8 820 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 SLC18B1Q6NT16 456 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 CORO6Q6QEF8 472 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 IQCF1Q8N6M8 205 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 ZNF525Q8N782 197 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 OR9Q1Q8NGQ5 310 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 ABHD4Q8TB40 342 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 FAM168AQ92567 244 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 MARS2Q96GW9 593 aaKnown RBP14.88□□□□□ -0.03
MDC1-206ENST00000489540 COQ7Q99807 217 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 PAPOLBQ9NRJ5 636 aaKnown RBP14.88□□□□□ -0.03
MDC1-206ENST00000489540 MRPL22Q9NWU5 206 aaKnown RBP14.88□□□□□ -0.03
MDC1-206ENST00000489540 TAAR3PQ9P1P4 343 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 MYEF2Q9P2K5 600 aaKnown RBP14.88□□□□□ -0.03
MDC1-206ENST00000489540 GRIP1Q9Y3R0 1128 aa14.88□□□□□ -0.03
MDC1-206ENST00000489540 SMAD7O15105 426 aaKnown RBP14.87□□□□□ -0.03
MDC1-206ENST00000489540 CLPTM1O96005 669 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 NGFP01138 241 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 IGHV3-13P01766 116 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 SPI1P17947 270 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 PAICSP22234 425 aaKnown RBP14.87□□□□□ -0.03
MDC1-206ENST00000489540 ALDH3B1P43353 468 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 PDLIM4P50479 330 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 DAPP51397 102 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 ECH1Q13011 328 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 NKPD1Q17RQ9 610 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 MBNL2Q5VZF2 373 aaKnown RBP14.87□□□□□ -0.03
MDC1-206ENST00000489540 ACSM5Q6NUN0 579 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 AMIGO2Q86SJ2 522 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 ZCCHC24Q8N2G6 241 aaKnown RBP14.87□□□□□ -0.03
MDC1-206ENST00000489540 PARP8Q8N3A8 854 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 SLC25A40Q8TBP6 338 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 LRTOMTQ8WZ04 291 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 ACANP16112 2415 aa14.87□□□□□ -0.03
MDC1-206ENST00000489540 MED13LQ71F56 2210 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 RNF223E7ERA6 249 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 J3QW42 95 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 NDUFS8O00217 210 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 LY6HO94772 140 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 MT-ND5P03915 603 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 RGS6P49758 472 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 CRISP1P54107 249 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 ESRRGP62508 458 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 MAD2L1BPQ15013 274 aaPredicted RBP14.86□□□□□ -0.03
MDC1-206ENST00000489540 ZFP1Q6P2D0 407 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 RFPL4BQ6ZWI9 263 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 LINC00346Q8IVM7 164 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 OR51L1Q8NGJ5 315 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 KLF14Q8TD94 323 aaPredicted RBP14.86□□□□□ -0.03
MDC1-206ENST00000489540 SNX33Q8WV41 574 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 ZNRF4Q8WWF5 429 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 PTP4A1Q93096 173 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 CENPNQ96H22 339 aaPredicted RBP14.86□□□□□ -0.03
MDC1-206ENST00000489540 PITX2Q99697 317 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 OR2J1Q9GZK6 312 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 SLC25A19Q9HC21 320 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 HINT3Q9NQE9 182 aaKnown RBP14.86□□□□□ -0.03
MDC1-206ENST00000489540 MAP1AP78559 2803 aaPredicted RBP14.86□□□□□ -0.03
MDC1-206ENST00000489540 CELSR1Q9NYQ6 3014 aa14.86□□□□□ -0.03
MDC1-206ENST00000489540 IGHV4-30-2A0A087WSY4 118 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 LOC390937A0A1W2PQ73 354 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 TVP23AA6NH52 213 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 GYPBP06028 91 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 DAOP14920 347 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 SLC25A16P16260 332 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 ZNF23P17027 643 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 KPNB1Q14974 876 aaKnown RBP14.85□□□□□ -0.03
MDC1-206ENST00000489540 TEX30Q5JUR7 227 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 SPATA46Q5T0L3 261 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 ZNF540Q8NDQ6 660 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 C10orf105Q8TEF2 133 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 SLC7A6Q92536 515 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 OTULINQ96BN8 352 aa14.85□□□□□ -0.03
MDC1-206ENST00000489540 RAB3IPQ96QF0 476 aaPredicted RBP14.85□□□□□ -0.03
MDC1-206ENST00000489540 TEP1Q99973 2627 aaKnown RBP14.85□□□□□ -0.03
MDC1-206ENST00000489540 ZNF469Q96JG9 3925 aaPredicted RBP14.85□□□□□ -0.03
MDC1-206ENST00000489540 RTTNQ86VV8 2226 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms