RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ZNF629Q9UEG4 869 aaPredicted RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 PCYOX1Q9UHG3 505 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 KIF26AQ9ULI4 1882 aaPredicted RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 A0A0J9YYE9 177 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 BCKDKO14874 412 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 XRCC2O43543 280 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 DPM1O60762 260 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 MED6O75586 246 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 SRP72O76094 671 aaKnown RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 RAB3DO95716 219 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 SNAI1O95863 264 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 C6orf47O95873 294 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 TRBC1P01850 177 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 HBE1P02100 147 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 TPM1P09493 284 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 CLTAP09496 248 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 FOLR1P15328 257 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 IGFBP3P17936 291 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 SRMP19623 302 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 U2AF2P26368 475 aaKnown RBP eCLIP1.96□□□□□ -2.1
RFC4-213ENST00000489028 HRH1P35367 487 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 GPX4P36969 197 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 NUP62P37198 522 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 FGF8P55075 233 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 CARD18P57730 90 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 ZNF33AQ06730 810 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 IFT88Q13099 833 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 RSPO1Q2MKA7 263 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 DEFB116Q30KQ4 102 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 LINC00483Q53H64 154 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 THEM4Q5T1C6 240 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 UBE2UQ5VVX9 321 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 ULK3Q6PHR2 472 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 MBOAT1Q6ZNC8 495 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 ABHD13Q7L211 337 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 C6orf120Q7Z4R8 191 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 MYOCDQ8IZQ8 938 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 OR10G2Q8NGC3 310 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 OR52E5Q8NH55 327 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 NUBPLQ8TB37 319 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 LKAAEAR1Q8TD35 194 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 MITD1Q8WV92 249 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 KIAA1143Q96AT1 154 aaPredicted RBP1.96□□□□□ -2.1
RFC4-213ENST00000489028 EEF1AKMT3Q96AZ1 226 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 FAM3DQ96BQ1 224 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 FOPNLQ96NB1 174 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 MICU1Q9BPX6 476 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 LZTS2Q9BRK4 669 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 DYRK4Q9NR20 520 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 ZNF226Q9NYT6 803 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 SLC25A37Q9NYZ2 338 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 DEC1Q9P2X7 70 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 RHBDD3Q9Y3P4 386 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 HEBP2Q9Y5Z4 205 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 KCNE3Q9Y6H6 103 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 TNIKQ9UKE5 1360 aa1.96□□□□□ -2.1
RFC4-213ENST00000489028 UBN2Q6ZU65 1347 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CENPJQ9HC77 1338 aaPredicted RBP1.95□□□□□ -2.1
RFC4-213ENST00000489028 TSPAN11A1L157 253 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 PRSS37A4D1T9 235 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 GABRR3A8MPY1 467 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 HIDE1A8MVS5 230 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 SMKR1H3BMG3 65 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 BOLA2-SMG1P6H3BVE0 249 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 NUPL2O15504 423 aaKnown RBP1.95□□□□□ -2.1
RFC4-213ENST00000489028 RAD51CO43502 376 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 SS18L1O75177 396 aaPredicted RBP1.95□□□□□ -2.1
RFC4-213ENST00000489028 FARS2O95363 451 aaKnown RBP1.95□□□□□ -2.1
RFC4-213ENST00000489028 UTS2O95399 124 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CD160O95971 181 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 MBP02144 154 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 BGLAPP02818 100 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 ARG1P05089 322 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CRYGCP07315 174 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 KRT16P08779 473 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 RHOXF2BP0C7M4 288 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 ZDHHC11BP0C7U3 371 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 STAG3L2P0CL84 134 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CTRB1P17538 263 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 RAB3BP20337 219 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CPN2P22792 545 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 OR1E1P30953 314 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 GPR1P46091 355 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 NMUP48645 174 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 PSMD4P55036 377 aaKnown RBP1.95□□□□□ -2.1
RFC4-213ENST00000489028 MXD1Q05195 221 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 QPRTQ15274 297 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 TTLL9Q3SXZ7 439 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 TPTE2P1Q5T6R2 138 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 TEX43Q6ZNM6 134 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 ZNF547Q8IVP9 402 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CMTM8Q8IZV2 173 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 LRRC75AQ8NAA5 344 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 TMEM104Q8NE00 496 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 OR4S2Q8NH73 311 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CA5BP1Q8WTZ4 195 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 PIH1D2Q8WWB5 315 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 NAT6Q93015 286 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 TMEM230Q96A57 120 aa1.95□□□□□ -2.1
RFC4-213ENST00000489028 CSPG4P5Q96PW8 444 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms