RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 OR8U1Q8NH10 309 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 PIFOQ8TCI5 191 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 TIMM17AQ99595 171 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 MICU1Q9BPX6 476 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 AGPAT4Q9NRZ5 378 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 RAB20Q9NX57 234 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 CCDC59Q9P031 241 aaKnown RBP1.87□□□□□ -2.11
CD46-215ENST00000488596 GCNT4Q9P109 453 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 ZNRD1Q9P1U0 126 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 OPN4Q9UHM6 478 aa1.87□□□□□ -2.11
CD46-215ENST00000488596 TRMT112Q9UI30 125 aaKnown RBP1.87□□□□□ -2.11
CD46-215ENST00000488596 KIF26AQ9ULI4 1882 aaPredicted RBP1.87□□□□□ -2.11
CD46-215ENST00000488596 TSSC4Q9Y5U2 329 aaPredicted RBP1.87□□□□□ -2.11
CD46-215ENST00000488596 A0A075B6Q4 140 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 LYRM9A8MSI8 78 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 ZNF705GA8MUZ8 300 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 NDUFAB1O14561 156 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 SLC9A3R1O14745 358 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 RAD51BO15315 384 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 RBFOX2O43251 390 aaKnown RBP eCLIP1.86□□□□□ -2.112e-6■■■□□ 16.6
CD46-215ENST00000488596 HUS1O60921 280 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 GCM2O75603 506 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 FLOT1O75955 427 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 OR2F2O95006 317 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 CCNB2O95067 398 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 VAMP5O95183 116 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 CD160O95971 181 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 ARG1P05089 322 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 OR56A5P0C7T3 313 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 ZNF286BP0CG31 522 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 MUC1P15941 1255 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 EIF2S2P20042 333 aaKnown RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 WARSP23381 471 aaKnown RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 OR1E1P30953 314 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 OTX1P32242 354 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 SSTR5P35346 364 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 P2RX1P51575 399 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 CDKN2DP55273 166 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 CCNA1P78396 465 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 TRAM2Q15035 370 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 PSMD5Q16401 504 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 SMUG1Q53HV7 270 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 C5orf47Q569G3 176 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 Q5W150 140 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 SAXO2Q658L1 398 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 TMEM220Q6QAJ8 160 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 NPSR1Q6W5P4 371 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 CENPQQ7L2Z9 268 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 WDR86Q86TI4 376 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 H1FOOQ8IZA3 346 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 LGI3Q8N145 548 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 ZNF561Q8N587 486 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 NPWQ8N729 165 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 COQ8AQ8NI60 647 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 C15orf40Q8WUR7 153 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 MRGPRFQ96AM1 343 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 ZNF317Q96PQ6 595 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 TGS1Q96RS0 853 aaKnown RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 ZNF382Q96SR6 550 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 BPIFA3Q9BQP9 254 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 RSPO3Q9BXY4 272 aaPredicted RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 PARP12Q9H0J9 701 aaKnown RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 GEMIN7Q9H840 131 aaKnown RBP1.86□□□□□ -2.11
CD46-215ENST00000488596 SIRT7Q9NRC8 400 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 DCAF16Q9NXF7 216 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 TMEM14AQ9Y6G1 99 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 KCNE3Q9Y6H6 103 aa1.86□□□□□ -2.11
CD46-215ENST00000488596 INSRP06213 1382 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 TRBV9A0A0B4J1U6 114 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 TMEM223A0PJW6 202 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 OR6C74A6NCV1 312 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 COLCA2A8K830 154 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 H7C417 338 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 ZNF207O43670 478 aaKnown RBP1.85□□□□□ -2.11
CD46-215ENST00000488596 DNAJB6O75190 326 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 KRT14P02533 472 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 CISD3P0C7P0 127 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 ZNF806P0C7X5 589 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 ATF6P18850 670 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 RAB3AP20336 220 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 DTYMKP23919 212 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 U2AF2P26368 475 aaKnown RBP eCLIP1.85□□□□□ -2.114e-10■■■□□ 16.2
CD46-215ENST00000488596 SLC11A1P49279 550 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 SEMG2Q02383 582 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 MERTKQ12866 999 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 ILKQ13418 452 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 DGCR6Q14129 220 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 IRF4Q15306 451 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 SPANXN2Q5MJ10 180 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
CD46-215ENST00000488596 UBALD2Q8IYN6 164 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 OR4C5Q8NGB2 326 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 OR4K5Q8NGD3 323 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 OR52E2Q8NGJ4 325 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 NRGNQ92686 78 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 TMEM230Q96A57 120 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 NTAN1Q96AB6 310 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 MCUR1Q96AQ8 359 aa1.85□□□□□ -2.11
CD46-215ENST00000488596 FLYWCH2Q96CP2 140 aaKnown RBP1.85□□□□□ -2.11
CD46-215ENST00000488596 SEH1LQ96EE3 360 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms