RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 NAA10P41227 235 aaPredicted RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 MTNR1AP48039 350 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 GDI2P50395 445 aaKnown RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 EIF2B1Q14232 305 aaKnown RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 MAD2L1BPQ15013 274 aaPredicted RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 TAF13Q15543 124 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 TBC1D28Q2M2D7 210 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 SLC18B1Q6NT16 456 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 ZNF774Q6NX45 483 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 ARL9Q6T311 187 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 DCXRQ7Z4W1 244 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 THAP5Q7Z6K1 395 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 TIGD4Q8IY51 512 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 SLC30A7Q8NEW0 376 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 OR51G2Q8NGK0 314 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 AKR7LQ8NHP1 331 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 THEM6Q8WUY1 208 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 RADILQ96JH8 1075 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 CNN2Q99439 309 aaKnown RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 MNTQ99583 582 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 ZNF184Q99676 751 aaPredicted RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 YIPF3Q9GZM5 350 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 MARCH7Q9H992 704 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 CDH20Q9HBT6 801 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 CENPMQ9NSP4 180 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 NPAP1Q9NZP6 1156 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 EIF3KQ9UBQ5 218 aaKnown RBP8.95□□□□□ -0.98
SKA1-204ENST00000488454 AASSQ9UDR5 926 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 LAMP5Q9UJQ1 280 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 POU2F3Q9UKI9 436 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 RAB26Q9ULW5 256 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 SPEF1Q9Y4P9 236 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 PCDHGB1Q9Y5G3 927 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 LHFPL6Q9Y693 200 aa8.95□□□□□ -0.98
SKA1-204ENST00000488454 USP9XQ93008 2570 aaPredicted RBP8.94□□□□□ -0.98
SKA1-204ENST00000488454 IGHV1-18A0A0C4DH31 117 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 C5orf49A4QMS7 147 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 OR6C6A6NF89 314 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 DPRXA6NFQ7 191 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 A6NNC1 897 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 VSTM5A8MXK1 200 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 FAM229AH3BQW9 127 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 SELENOFO60613 162 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 IGLV1-44P01699 117 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 GNAO1P09471 354 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 CECR9P0C854 216 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 COX5BP10606 129 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 ZNF14P17017 642 aaPredicted RBP8.94□□□□□ -0.98
SKA1-204ENST00000488454 GABRB1P18505 474 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 STOMP27105 288 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 APEX1P27695 318 aaKnown RBP8.94□□□□□ -0.98
SKA1-204ENST00000488454 RPS27P42677 84 aaKnown RBP8.94□□□□□ -0.98
SKA1-204ENST00000488454 SLC15A1P46059 708 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 HTR5AP47898 357 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 NUDT6P53370 316 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 ISL1P61371 349 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 GALK2Q01415 458 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 BSPH1Q075Z2 132 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 ECH1Q13011 328 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 CDK5R2Q13319 367 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 GGTLC2Q14390 218 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 RAB35Q15286 201 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 PCK2Q16822 640 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 KLHL22Q53GT1 634 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 ELFN2Q5R3F8 820 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 NCMAPQ5T1S8 102 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 KRT80Q6KB66 452 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 SLC22A25Q6T423 547 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 UNQ6126/PRO20091Q6UXV3 157 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 USP51Q70EK9 711 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.94□□□□□ -0.98
SKA1-204ENST00000488454 OR1F12Q8NHA8 337 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 CNIH3Q8TBE1 160 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 ASB17Q8WXJ9 295 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 RNFT2Q96EX2 444 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 MYCBPQ99417 103 aaPredicted RBP8.94□□□□□ -0.98
SKA1-204ENST00000488454 HDHD2Q9H0R4 259 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 WNT5BQ9H1J7 359 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 NOX3Q9HBY0 568 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 RNF115Q9Y4L5 304 aa8.94□□□□□ -0.98
SKA1-204ENST00000488454 IRGMA1A4Y4 181 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 DEFB108AA8MXU0 73 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ZNF670-ZNF695F2Z2N8 137 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 J3QW42 95 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ABCD4O14678 606 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 PHYHO14832 338 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 FADS2O95864 444 aaKnown RBP8.93□□□□□ -0.98
SKA1-204ENST00000488454 LYNP07948 512 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 CELA3BP08861 270 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 SBK2P0C263 348 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 OR2T7P0C7T2 308 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 DBTP11182 482 aaKnown RBP8.93□□□□□ -0.98
SKA1-204ENST00000488454 MYF6P23409 242 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 CSNK2BP67870 215 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 HIST1H3AP68431 136 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 NAAAQ02083 359 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 CCDC92Q53HC0 331 aaPredicted RBP8.93□□□□□ -0.98
SKA1-204ENST00000488454 HIST2H3PS2Q5TEC6 136 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 KCTD18Q6PI47 426 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms