RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ZNF169Q14929 603 aaPredicted RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 ZNF829Q3KNS6 432 aaPredicted RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 RNFT1Q5M7Z0 435 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 OTPQ5XKR4 325 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 CEACAM19Q7Z692 300 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 OR2G2Q8NGZ5 317 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 WDR12Q9GZL7 423 aaKnown RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 LDAHQ9H6V9 325 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 SEC61A2Q9H9S3 476 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 PLGRKTQ9HBL7 147 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 POLE4Q9NR33 117 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 FRRS1LQ9P0K9 344 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 PEX16Q9Y5Y5 336 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 IQCMA0A1B0GVH7 501 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 TFECO14948 347 aaPredicted RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 ARL6IP5O75915 188 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 ZFPL1O95159 310 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 CPN1P15169 458 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 MYL9P24844 172 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 S100A5P33763 92 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 GUCA1AP43080 201 aaPredicted RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
NELFE-209ENST00000488426 LSM6P62312 80 aaKnown RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 SRYQ05066 204 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 MXD1Q05195 221 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 ZMAT1Q5H9K5 638 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 Q6ZNX1 250 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 RHOUQ7L0Q8 258 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 TPRA1Q86W33 373 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 OR5AK2Q8NH90 309 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 RNF133Q8WVZ7 376 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 HSD17B8Q92506 261 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 MAP6Q96JE9 813 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 C6orf62Q9GZU0 229 aaPredicted RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 COMMD4Q9H0A8 199 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 C1orf198Q9H425 327 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 EXO5Q9H790 373 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 RNF122Q9H9V4 155 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 EMC3Q9P0I2 261 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 POLR1DQ9Y2S0 133 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 CENPEQ02224 2701 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 OR4C45A6NMZ5 311 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 DHHO43323 396 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 IGHG3P01860 377 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 CLEC2LP0C7M8 214 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 CFL1P23528 166 aaKnown RBP11.22□□□□□ -0.61
NELFE-209ENST00000488426 DCTDP32321 178 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 ZNF84P51523 738 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 HNRNPA0Q13151 305 aaKnown RBP11.22□□□□□ -0.61
NELFE-209ENST00000488426 PHYHD1Q5SRE7 291 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 RIPPLY2Q5TAB7 128 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 LINC00346Q8IVM7 164 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 OR2AJ1Q8NGZ0 328 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 ABHD3Q8WU67 409 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 AP3S1Q92572 193 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 THRSPQ92748 146 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 BORCS5Q969J3 196 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 NELFAQ9H3P2 528 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 TPK1Q9H3S4 243 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 B3GAT2Q9NPZ5 323 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 ERRFI1Q9UJM3 462 aaPredicted RBP11.22□□□□□ -0.61
NELFE-209ENST00000488426 LHFPL6Q9Y693 200 aa11.22□□□□□ -0.61
NELFE-209ENST00000488426 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 ZNF879B4DU55 563 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 DVL2O14641 736 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 UCHL1P09936 223 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 MSR1P21757 451 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 CDAP32320 146 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 PMP22Q01453 160 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 RNPS1Q15287 305 aaKnown RBP11.21□□□□□ -0.61
NELFE-209ENST00000488426 OR7E24Q6IFN5 339 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 CHMP1BQ7LBR1 199 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 OR13C5Q8NGS8 318 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 SLAMF6Q96DU3 332 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 SMURF1Q9HCE7 757 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 EMC7Q9NPA0 242 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 GDF2Q9UK05 429 aaPredicted RBP11.21□□□□□ -0.61
NELFE-209ENST00000488426 R4GMQ9 66 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 MYO7BQ6PIF6 2116 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 DOPEY1Q5JWR5 2465 aa11.21□□□□□ -0.61
NELFE-209ENST00000488426 SHISA3A0PJX4 238 aa11.21□□□□□ -0.62
NELFE-209ENST00000488426 ZNF724A8MTY0 619 aa11.21□□□□□ -0.62
NELFE-209ENST00000488426 AGFG2O95081 481 aa11.21□□□□□ -0.62
NELFE-209ENST00000488426 WNT11O96014 354 aa11.21□□□□□ -0.62
NELFE-209ENST00000488426 H2BFMP0C1H6 154 aa11.21□□□□□ -0.62
NELFE-209ENST00000488426 MAPK3P27361 379 aaPredicted RBP11.21□□□□□ -0.62
NELFE-209ENST00000488426 MRPS34P82930 218 aaKnown RBP11.21□□□□□ -0.62
NELFE-209ENST00000488426 WDR38Q5JTN6 314 aa11.21□□□□□ -0.62
NELFE-209ENST00000488426 THOC7Q6I9Y2 204 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms