RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	ZCCHC4	Q9H5U6	513 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	GPR35	Q9HC97	309 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	NOX4	Q9NPH5	578 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	G6PC2	Q9NQR9	355 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	OR52A1	Q9UKL2	312 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	B3GNT3	Q9Y2A9	372 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	EMC9	Q9Y3B6	208 aa		12.98	□□□□□ -0.33
FGFR1-222	ENST00000487647	CTDSP2	O14595	271 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	DVL2	O14641	736 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	APOC1	P02654	83 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	UBC	P0CG48	685 aa	Known RBP	12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	ACHE	P22303	614 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	HSD11B1	P28845	292 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	PSMD7	P51665	324 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	PPP5C	P53041	499 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	PSMA6	P60900	246 aa	Known RBP	12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	PCBD1	P61457	104 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	FAM27D1	Q5T7N8	215 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	ADGRE4P	Q86SQ3	457 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	CCDC190	Q86UF4	302 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	APH1A	Q96BI3	265 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	FOXB1	Q99853	325 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	PNRC2	Q9NPJ4	139 aa	Known RBP	12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	FAM206A	Q9NX38	181 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	CMAHP	Q9Y471	501 aa		12.97	□□□□□ -0.33
FGFR1-222	ENST00000487647	KIAA1549	Q9HCM3	1950 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	TRBV5-7	A0A0A0MS05	114 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647		A0A1B0GTH9	108 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	NOTO	A8MTQ0	251 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	RER1	O15258	196 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	PIN1P1	O15428	100 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	FARS2	O95363	451 aa	Known RBP	12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	WNT11	O96014	354 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	PPP3R1	P63098	170 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	MFGE8	Q08431	387 aa	Predicted RBP	12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	SCRN3	Q0VDG4	424 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	ECH1	Q13011	328 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.96	□□□□□ -0.33	2e-7	■■■□□ 18.4
FGFR1-222	ENST00000487647	CEACAM16	Q2WEN9	425 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	BCL2L15	Q5TBC7	163 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	C16orf87	Q6PH81	154 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	ELMOD2	Q8IZ81	293 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	KCNJ15	Q99712	375 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	ATF6B	Q99941	703 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	CALHM2	Q9HA72	323 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	TCF7L1	Q9HCS4	588 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	FBXL3	Q9UKT7	428 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	HHLA2	Q9UM44	414 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	GTF2A1L	Q9UNN4	478 aa		12.96	□□□□□ -0.33
FGFR1-222	ENST00000487647	AHRR	A9YTQ3	701 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ZNF587B	E7ETH6	402 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	RGS5	O15539	181 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	CD2	P06729	351 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TNFSF8	P32971	234 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TSPO2	Q5TGU0	170 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	SFXN4	Q6P4A7	337 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ZNF627	Q7L945	461 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ALKBH3	Q96Q83	286 aa	Predicted RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TAAR6	Q96RI8	345 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	SLC30A2	Q9BRI3	323 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	MRI1	Q9BV20	369 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	NUFIP1	Q9UHK0	495 aa	Known RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ADAM30	Q9UKF2	790 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	DHDH	Q9UQ10	334 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	SLC22A13	Q9Y226	551 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647		A0A1W2PPK0	400 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	APEX1	P27695	318 aa	Known RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TMPRSS3	P57727	454 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	C3AR1	Q16581	482 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	CEP78	Q5JTW2	689 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ELFN2	Q5R3F8	820 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	P4HA3	Q7Z4N8	544 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ZNF100	Q8IYN0	542 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	RDH10	Q8IZV5	341 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	SLC22A24	Q8N4F4	322 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TSEN15	Q8WW01	171 aa	Known RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TMEM106A	Q96A25	262 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ZNF837	Q96EG3	531 aa	Predicted RBP	12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	PBOV1	Q9GZY1	135 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	HDHD2	Q9H0R4	259 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	ABRACL	Q9P1F3	81 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	UPB1	Q9UBR1	384 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647	TIMM10B	Q9Y5J6	103 aa		12.95	□□□□□ -0.34
FGFR1-222	ENST00000487647		A0A0G2JK05	382 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	SLC19A2	O60779	497 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	SS18L1	O75177	396 aa	Predicted RBP	12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	NCR1	O76036	304 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	TGM6	O95932	706 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	PDGFA	P04085	211 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	CAV3	P56539	151 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	RAB35	Q15286	201 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	TBR1	Q16650	682 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	CCDC92	Q53HC0	331 aa	Predicted RBP	12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	IDNK	Q5T6J7	187 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	LINGO2	Q7L985	606 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	NR2C2AP	Q86WQ0	139 aa		12.94	□□□□□ -0.34
FGFR1-222	ENST00000487647	LRRC18	Q8N456	261 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms