RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SFXN2Q96NB2 322 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 KCNK17Q96T54 332 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 ATG5Q9H1Y0 275 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 APMAPQ9HDC9 416 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 PILRBQ9UKJ0 227 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 HHLA2Q9UM44 414 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 COLQQ9Y215 455 aaPredicted RBP23.34■■□□□ 1.33
HLA-C-208ENST00000487245 DOK2O60496 412 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 LPLP06858 475 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 FBXO45P0C2W1 286 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 IL11P20809 199 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 TAS2R19P59542 299 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 HSF1Q00613 529 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 AANATQ16613 207 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 ARSKQ6UWY0 536 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 C3P1Q6ZMU1 363 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 PPP1R14AQ96A00 147 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 SPSB2Q99619 263 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 MYOZ1Q9NP98 299 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-208ENST00000487245 SERINC1Q9NRX5 453 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 TAS2R4Q9NYW5 299 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 MYOTQ9UBF9 498 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 NUP50Q9UKX7 468 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 GTF2A1LQ9UNN4 478 aa23.33■■□□□ 1.33
HLA-C-208ENST00000487245 A0A1W2PPL8 197 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 LOC390937A0A1W2PQ73 354 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 LIPT2A6NK58 231 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 ITGB2P05107 769 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 FOSL2P15408 326 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 CAPZA1P52907 286 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 SEC61A1P61619 476 aaKnown RBP23.32■■□□□ 1.32
HLA-C-208ENST00000487245 HLA-BQ31612 363 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 C1orf100Q5SVJ3 147 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 GABRG1Q8N1C3 465 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 OR51S1Q8NGJ8 323 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 PMEPA1Q969W9 287 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 C5orf34Q96MH7 638 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 UPB1Q9UBR1 384 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 VDAC3Q9Y277 283 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 HRGP04196 525 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 OTPQ5XKR4 325 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 B3GNTL1Q67FW5 361 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-208ENST00000487245 NHLRC1Q6VVB1 395 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 ZNF704Q6ZNC4 412 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-208ENST00000487245 IDO2Q6ZQW0 420 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 ADGRE4PQ86SQ3 457 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 WDR5BQ86VZ2 330 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 KDM8Q8N371 416 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 PLPP7Q8NBV4 271 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 SEH1LQ96EE3 360 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 NPAS1Q99742 590 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 CMKLR1Q99788 373 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 MESP1Q9BRJ9 268 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 KCNK15Q9H427 330 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 CDCP1Q9H5V8 836 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 G6PC2Q9NQR9 355 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 MED9Q9NWA0 146 aa23.32■■□□□ 1.32
HLA-C-208ENST00000487245 A0A1W2PNV4 684 aa23.31■■□□□ 1.32
HLA-C-208ENST00000487245 CD3DP04234 171 aa23.31■■□□□ 1.32
HLA-C-208ENST00000487245 RLN1P04808 185 aa23.31■■□□□ 1.32
HLA-C-208ENST00000487245 TSSK4Q6SA08 328 aa23.31■■□□□ 1.32
HLA-C-208ENST00000487245 ST7LQ8TDW4 575 aa23.31■■□□□ 1.32
HLA-C-208ENST00000487245 SLC25A44Q96H78 314 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-208ENST00000487245 METTL7AQ9H8H3 244 aa23.31■■□□□ 1.32
HLA-C-208ENST00000487245 F5H5P2 479 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 LYPD6Q86Y78 171 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 MUC20Q8N307 709 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-208ENST00000487245 ADPRHL1Q8NDY3 354 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 CCDC107Q8WV48 283 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 SLC25A21Q9BQT8 299 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-208ENST00000487245 PISDQ9UG56 409 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 OR52A1Q9UKL2 312 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 TMA7Q9Y2S6 64 aaKnown RBP23.3■■□□□ 1.32
HLA-C-208ENST00000487245 WIF1Q9Y5W5 379 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 CACNA1EQ15878 2313 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 I3L521 148 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 RAD1O60671 282 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 B3GALNT1O75752 331 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 CALCRP30988 508 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 H2BFSP57053 126 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 POU3F1Q03052 451 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-208ENST00000487245 PLPPR5Q32ZL2 321 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 GLYATL3Q5SZD4 288 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 FAM69BQ5VUD6 431 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 TMEM244Q5VVB8 128 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 MDGA2Q7Z553 956 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 NKAIN3Q8N8D7 197 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 OR5M1Q8NGP8 315 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 LRRC20Q8TCA0 184 aa23.3■■□□□ 1.32
HLA-C-208ENST00000487245 FOXRED1Q96CU9 486 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-208ENST00000487245 ADAMTS9Q9P2N4 1935 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 MEN1O00255 615 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 MPZL1O95297 269 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 FGF5P12034 268 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 RAB6AP20340 208 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 S100A11P31949 105 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 PTGDSP41222 190 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 DNASE1L1P49184 302 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 GPR85P60893 370 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 EDAQ92838 391 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms