RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LRRC75AQ8NAA5 344 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 ZNF420Q8TAQ5 688 aaPredicted RBP16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 RAB40AQ8WXH6 277 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 HAVCR1Q96D42 359 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 TMEM165Q9HC07 324 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 BAG5Q9UL15 447 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 A0A1B0GUS0 222 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 FAM181BA6NEQ2 426 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 THRBP10828 461 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 CPT2P23786 658 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR1E2P47887 323 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 SCRN3Q0VDG4 424 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 C17orf107Q6ZR85 190 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 HDXQ7Z353 690 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 SH3GL1Q99961 368 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 WACQ9BTA9 647 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 PRDM13Q9H4Q3 707 aa16.26■□□□□ 0.19
SMPDL3A-202ENST00000487215 A6NIZ1 184 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 SRRM5B3KS81 715 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 H7C1C5 153 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 IFNL4K9M1U5 179 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 CYB5R3P00387 301 aaPredicted RBP16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 IFI30P13284 250 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 RAG2P55895 527 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 RAP1BP61224 184 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 LCN6P62502 163 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 RAP1AP62834 184 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 GUCY1A3Q02108 690 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 CYLC2Q14093 348 aaPredicted RBP16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 ZNF362Q5T0B9 420 aaPredicted RBP16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 BRD3OSQ6XYD6 125 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 VASH1Q7L8A9 365 aaPredicted RBP16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR5AS1Q8N127 324 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 ATG16L2Q8NAA4 619 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR10AD1Q8NGE0 317 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR10S1Q8NGN2 331 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR4F5Q8NH21 305 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 PTP4A1Q93096 173 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 ZDHHC16Q969W1 377 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 BPIFA2Q96DR5 249 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 MEGF10Q96KG7 1140 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 BEX1Q9HBH7 125 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 TNFRSF19Q9NS68 423 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 MIOXQ9UGB7 285 aa16.25■□□□□ 0.19
SMPDL3A-202ENST00000487215 KIR2DS1A0A191URI9 304 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 SGCEO43556 437 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 RELBQ01201 579 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 SLC27A4Q6P1M0 643 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 C1orf94Q6P1W5 598 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 MICU2Q8IYU8 434 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR51A7Q8NH64 312 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 SLC7A6Q92536 515 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 NEIL1Q96FI4 390 aaPredicted RBP16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 PLEKHA8Q96JA3 519 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 COG8Q96MW5 612 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 CITED1Q99966 193 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 TMEM246Q9BRR3 403 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 ARGLU1Q9NWB6 273 aaPredicted RBP16.24■□□□□ 0.19
SMPDL3A-202ENST00000487215 TRAV27A0A087WT01 109 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 RAC2P15153 192 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 FHL1Q13642 323 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 OLFML2AQ68BL7 652 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 BRICD5Q6PL45 260 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 FIP1L1Q6UN15 594 aaKnown RBP16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 CALHM3Q86XJ0 350 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 CCT8L2Q96SF2 557 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 NUDT16L1Q9BRJ7 211 aaKnown RBP16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 MARCH7Q9H992 704 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 C1RLQ9NZP8 487 aa16.23■□□□□ 0.19
SMPDL3A-202ENST00000487215 A0A0G2JND7 137 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 HTR3EA5X5Y0 456 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 EDF1O60869 148 aaKnown RBP16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 IFNA14P01570 189 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 CRYBA1P05813 215 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 FUT4P22083 530 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 PITPNBP48739 271 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 ST3GAL3Q11203 375 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 HLXQ14774 488 aaPredicted RBP16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 ZNF404Q494X3 552 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 RABL3Q5HYI8 236 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR2T2Q6IF00 324 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 NANOGP8Q6NSW7 305 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 RHOUQ7L0Q8 258 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 FITM2Q8N6M3 262 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR8B3Q8NGG8 313 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 OR8B2Q96RD0 313 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 ECSITQ9BQ95 431 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 CHIAQ9BZP6 476 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 MMP27Q9H306 513 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 PTTG3PQ9NZH4 202 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 A4GNTQ9UNA3 340 aa16.22■□□□□ 0.19
SMPDL3A-202ENST00000487215 IGHV3-64DA0A0J9YX35 117 aa16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 H0YL77 283 aa16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 NDUFA7O95182 113 aa16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 NPPAP01160 153 aa16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 SRP9P49458 86 aaKnown RBP16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 FGF12P61328 243 aa16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 AQP6Q13520 282 aa16.21■□□□□ 0.19
SMPDL3A-202ENST00000487215 FAM201AQ5SY85 155 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms