RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 ERLIN2O94905 339 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 KLF8O95600 359 aaPredicted RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 IGHV2-5P01817 119 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 PABPC4LP0CB38 370 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 DNAH10OSP0CZ25 163 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 GALP22466 123 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 CHMLP26374 656 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 ATP5C1P36542 298 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 YAP1P46937 504 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 PRRX1P54821 245 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 N4BP2L1Q5TBK1 243 aaPredicted RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 TMEM107Q6UX40 140 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 SLC25A48Q6ZT89 311 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 NDRG1Q92597 394 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 HSFY1Q96LI6 401 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 NUP58Q9BVL2 599 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 HES7Q9BYE0 225 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 OR11A1Q9GZK7 315 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 NXF3Q9H4D5 531 aaKnown RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 CELA1Q9UNI1 258 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 CAB39Q9Y376 341 aaPredicted RBP3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 SLC25A15Q9Y619 301 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 IGF2RP11717 2491 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 LAMA5O15230 3695 aa3.39□□□□□ -1.87
PRPF38A-203ENST00000487160 KIAA1549LQ6ZVL6 1849 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 SERTM2A0A1B0GWG4 89 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 OR2AG2A6NM03 316 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 C12orf71A8MTZ7 269 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 CCL21O00585 134 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 TRAF3IP2O43734 574 aaPredicted RBP3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 CRYGBP07316 175 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 TNNI1P19237 187 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 IFNA8P32881 189 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 FBXW4P57775 412 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 PPP1R7Q15435 360 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 CYTH1Q15438 398 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 TGFBIQ15582 683 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 ARMC12Q5T9G4 340 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 THOC6Q86W42 341 aaKnown RBP3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 OR2G2Q8NGZ5 317 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 PLPPR1Q8TBJ4 325 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 AGR3Q8TD06 166 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 STMN2Q93045 179 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 MYDGFQ969H8 173 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 SRMSQ9H3Y6 488 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 NANOGQ9H9S0 305 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 MRPL47Q9HD33 250 aaKnown RBP3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 MMP26Q9NRE1 261 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 INPP5EQ9NRR6 644 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 RGS18Q9NS28 235 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 RAB20Q9NX57 234 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 PSMC3IPQ9P2W1 217 aaPredicted RBP3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 GINS2Q9Y248 185 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 MYO16Q9Y6X6 1858 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 VWA8A3KMH1 1905 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 CLUHO75153 1309 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 TTC41PQ6P2S7 1318 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 PHLPP2Q6ZVD8 1323 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 FREM2Q5SZK8 3169 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 CNOT1A5YKK6 2376 aaKnown RBP3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 SHROOM3Q8TF72 1996 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 MAST4O15021 2626 aa3.38□□□□□ -1.87
PRPF38A-203ENST00000487160 A0A0G2JN53 185 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 GOLGA6L7A0A1B0GV03 622 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 GSTTP1A0A1W2PQM5 241 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 GOSR2O14653 212 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 RNF13O43567 381 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF861PO60384 105 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 MOSP00540 346 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 C2P06681 752 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 DUX4L4P0CJ87 422 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 TCN1P20061 433 aaPredicted RBP3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 NPBWR2P48146 333 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 WNT4P56705 351 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 UNC119Q13432 240 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 HTR4Q13639 388 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 CLLU1OSQ5K130 101 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 PRAMEF20Q5VT98 475 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 LCN12Q6JVE5 192 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 CNIH2Q6PI25 160 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 ACP7Q6ZNF0 438 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 PUSL1Q8N0Z8 303 aaKnown RBP3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 RDH5Q92781 318 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 SLC35E1Q96K37 410 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 RARRES2Q99969 163 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 CENPKQ9BS16 269 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 RANBP3Q9H6Z4 567 aaPredicted RBP3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 RPS6KB2Q9UBS0 482 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 RAB23Q9ULC3 237 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 STARD10Q9Y365 291 aa3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 TNRC6BQ9UPQ9 1833 aaKnown RBP3.37□□□□□ -1.87
PRPF38A-203ENST00000487160 CEP192Q8TEP8 1941 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 FLNBO75369 2602 aaKnown RBP3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 HELZ2Q9BYK8 2649 aaKnown RBP3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 PANO1I0J062 215 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 MGRN1O60291 552 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms