RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 RPS27AP62979 156 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 UBA52P62987 128 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 PAN3Q58A45 887 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 NKAPLQ5M9Q1 402 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 LCN10Q6JVE6 187 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 FAM122BQ7Z309 247 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TAF8Q7Z7C8 310 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 CDC20BQ86Y33 519 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 CCDC107Q8WV48 283 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TM4SF19Q96DZ7 209 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 MESP1Q9BRJ9 268 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 NICN1Q9BSH3 213 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SOX7Q9BT81 388 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 RSRP1Q9BUV0 290 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SLC25A32Q9H2D1 315 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 MTIF3Q9H2K0 278 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 PRTFDC1Q9NRG1 225 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 GDE1Q9NZC3 331 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TNFSF18Q9UNG2 199 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TRAV20A0A0B4J274 112 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 EIF4E2O60573 245 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 C5AR1P21730 350 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ADH6P28332 368 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TSFMP43897 325 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 PRPS1P60891 318 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 GPR85P60893 370 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 DMWDQ09019 674 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ELAVL1Q15717 326 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 C9orf50Q5SZB4 431 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 MCATQ8IVS2 390 aaKnown RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 OR5M8Q8NGP6 311 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 OR51F2Q8NH61 342 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SLC37A2Q8TED4 501 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SEMA6CQ9H3T2 930 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ETV7Q9Y603 341 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SLCO1B1Q9Y6L6 691 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TRBV5-5A0A0J9YX44 114 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 PMS2P2O95744 297 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 IFNA6P05013 189 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ITGB2P05107 769 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 HOXB5P09067 269 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ACKR1Q16570 336 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM196Q5HYL7 178 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 PABPC1L2AQ5JQF8 200 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF585AQ6P3V2 769 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 MYO7BQ6PIF6 2116 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 OR13C9Q8NGT0 318 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 GPX8Q8TED1 209 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 FGF14Q92915 247 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 FGGYQ96C11 551 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 BMFQ96LC9 184 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 SPSB2Q99619 263 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
HSPG2-211ENST00000486901 ARPC3O15145 178 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 BCL2L11O43521 198 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 STK17BO94768 372 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 AQP8O94778 261 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 APODP05090 189 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 RBM34P42696 430 aaKnown RBP11.12□□□□□ -0.63
HSPG2-211ENST00000486901 PRSS12P56730 875 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 FLI1Q01543 452 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF776Q68DI1 518 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-211ENST00000486901 MOB3CQ70IA8 216 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF101Q8IZC7 436 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 NT5CQ8TCD5 201 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 HERVK_113Q902F9 699 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SLC22A18Q96BI1 424 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 CTHRC1Q96CG8 243 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SCPEP1Q9HB40 452 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 TAS2R8Q9NYW2 309 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 CKLFQ9UBR5 152 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 HEBP2Q9Y5Z4 205 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 A0A087WV62 115 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM212A6NML5 194 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 LINC00587B1AMM8 73 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SULT2B1O00204 365 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SLC17A2O00624 439 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SFTPBP07988 381 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SLC35E2P0CK97 266 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 CXCR1P25024 350 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 CD1CP29017 333 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 EBPQ15125 230 aaKnown RBP11.12□□□□□ -0.63
HSPG2-211ENST00000486901 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 LINC00114Q6XXX2 140 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 EID2Q8N6I1 236 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 ASB5Q8WWX0 329 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 TSLPQ969D9 159 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF629Q9UEG4 869 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-211ENST00000486901 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 WIPF3A6NGB9 483 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 C17orf105B2RV13 164 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 HOXB2P14652 356 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 RAB13P51153 203 aa11.12□□□□□ -0.63
HSPG2-211ENST00000486901 CCINQ13939 588 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms