RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 JSRP1Q96MG2 331 aaPredicted RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 OR2A5Q96R48 311 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 BEX1Q9HBH7 125 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 MRM3Q9HC36 420 aaKnown RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 AGPAT4Q9NRZ5 378 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 DDX18Q9NVP1 670 aaKnown RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 PDP1Q9P0J1 537 aaPredicted RBP2.9□□□□□ -1.95
SMC4-218ENST00000486711 SCN2AQ99250 2005 aa2.9□□□□□ -1.95
SMC4-218ENST00000486711 TRAV25A0A0B4J276 109 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 SNAI2O43623 268 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 AIREO43918 545 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 BCHEP06276 602 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 STAG3L3P0CL85 134 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 RALBP11234 206 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 MAGP20916 626 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 U2AF2P26368 475 aaKnown RBP eCLIP2.89□□□□□ -1.95
SMC4-218ENST00000486711 TNFSF9P41273 254 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 PPOXP50336 477 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 ILKQ13418 452 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 KHDRBS2Q5VWX1 349 aaKnown RBP2.89□□□□□ -1.95
SMC4-218ENST00000486711 METTL21CQ5VZV1 264 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 SAXO1Q8IYX7 474 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 CBR4Q8N4T8 237 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 FAM86B1Q8N7N1 296 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 ZFP41Q8N8Y5 198 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 CHST4Q8NCG5 386 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 LRRC29Q8WV35 223 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 SLC7A5P2Q9GIP4 190 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 PIGUQ9H490 435 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 RPP21Q9H633 154 aaKnown RBP2.89□□□□□ -1.95
SMC4-218ENST00000486711 PSME2Q9UL46 239 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 MROH7-TTC4A0A0A0MT08 1334 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 TTC41PQ6P2S7 1318 aa2.89□□□□□ -1.95
SMC4-218ENST00000486711 ENTPD5O75356 428 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 FLOT1O75955 427 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 HLA-HP01893 362 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 HBE1P02100 147 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 CLTAP09496 248 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 UBTFL6P0CB48 400 aaPredicted RBP2.88□□□□□ -1.95
SMC4-218ENST00000486711 UBCP0CG48 685 aaKnown RBP2.88□□□□□ -1.95
SMC4-218ENST00000486711 ERGP11308 486 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 RAB3AP20336 220 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 CCT6AP40227 531 aaKnown RBP2.88□□□□□ -1.95
SMC4-218ENST00000486711 SLC1A2P43004 574 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 RPS5P46782 204 aaKnown RBP2.88□□□□□ -1.95
SMC4-218ENST00000486711 P2RX1P51575 399 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 RAD51Q06609 339 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 CDH17Q12864 832 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 ITIH4Q14624 930 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 IRF4Q15306 451 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 ORMDL2Q53FV1 153 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 DNAJC24Q6P3W2 148 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 ZFP2Q6ZN57 461 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 MBOAT2Q6ZWT7 520 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 ABHD12BQ7Z5M8 362 aaPredicted RBP2.88□□□□□ -1.95
SMC4-218ENST00000486711 METTL13Q8N6R0 699 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 CYB561D1Q8N8Q1 229 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 SNX31Q8N9S9 440 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 FAM184AQ8NB25 1140 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 OR52E2Q8NGJ4 325 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 OR5W2Q8NH69 310 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 OR51E1Q8TCB6 317 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 STARD4Q96DR4 205 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 NDFIP1Q9BT67 221 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 CHAC1Q9BUX1 264 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 TMEM38AQ9H6F2 299 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 SYNDIG1Q9H7V2 258 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 HMG20AQ9NP66 347 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 MYOZ2Q9NPC6 264 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 CHRAC1Q9NRG0 131 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 MYEF2Q9P2K5 600 aaKnown RBP2.88□□□□□ -1.95
SMC4-218ENST00000486711 PSG11Q9UQ72 335 aa2.88□□□□□ -1.95
SMC4-218ENST00000486711 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 IGLV1-50A0A075B6I6 118 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 IGHV5-10-1A0A0J9YXX1 117 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 ANKRD63C9JTQ0 380 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 SLC9A3R1O14745 358 aaPredicted RBP2.87□□□□□ -1.95
SMC4-218ENST00000486711 FCN3O75636 299 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 CD160O95971 181 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 IFNW1P05000 195 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 EIF4EP06730 217 aaKnown RBP2.87□□□□□ -1.95
SMC4-218ENST00000486711 CD3GP09693 182 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 IGHV1-8P0DP01 117 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PGAM1P18669 254 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 HCAR3P49019 387 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PPP1CBP62140 327 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 ART3Q13508 389 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 NCF4Q15080 339 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PON2Q15165 354 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PTGES3Q15185 160 aaKnown RBP2.87□□□□□ -1.95
SMC4-218ENST00000486711 PLCXD3Q63HM9 321 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 TTC19Q6DKK2 380 aaPredicted RBP2.87□□□□□ -1.95
SMC4-218ENST00000486711 NPSR1Q6W5P4 371 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 C12orf54Q6X4T0 127 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 FBXW12Q6X9E4 464 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PGAM4Q8N0Y7 254 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 OR6Q1Q8NGQ2 317 aa2.87□□□□□ -1.95
SMC4-218ENST00000486711 PEX13Q92968 403 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms