RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 MED20Q9H944 212 aa11.12□□□□□ -0.63
SSR4-211ENST00000486204 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
SSR4-211ENST00000486204 TIMM10BQ9Y5J6 103 aa11.12□□□□□ -0.63
SSR4-211ENST00000486204 COMMD3-BMI1R4GMX3 469 aa11.12□□□□□ -0.63
SSR4-211ENST00000486204 CR1P17927 2039 aa11.12□□□□□ -0.63
SSR4-211ENST00000486204 IQCMA0A1B0GVH7 501 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 EI24O14681 340 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 SGCEO43556 437 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 SYNGR3O43761 229 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 GPRIN2O60269 458 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 DOK2O60496 412 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 ICMTO60725 284 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 TMCC2O75069 709 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 PTHP01270 115 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 ALPLP05186 524 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 COX5BP10606 129 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 STOMP27105 288 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 APOBEC3AP31941 199 aaPredicted RBP11.11□□□□□ -0.63
SSR4-211ENST00000486204 THBS4P35443 961 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 WNT5AP41221 380 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 CENPAP49450 140 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 FABP6P51161 128 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 TEKQ02763 1124 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 PLP2Q04941 152 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 DAG1Q14118 895 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 TBC1D28Q2M2D7 210 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 MST1LQ2TV78 715 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 SLX4IPQ5VYV7 408 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 C12orf73Q69YU5 71 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 SLC18B1Q6NT16 456 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 MUC15Q8N387 334 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 PROKR2Q8NFJ6 384 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 TMEM171Q8WVE6 324 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 ZNF701Q9NV72 531 aaPredicted RBP11.11□□□□□ -0.63
SSR4-211ENST00000486204 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 USE1Q9NZ43 259 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 CYB5R1Q9UHQ9 305 aa11.11□□□□□ -0.63
SSR4-211ENST00000486204 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 TVP23AA6NH52 213 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 A8MV72 311 aaPredicted RBP11.1□□□□□ -0.63
SSR4-211ENST00000486204 E9PQ18 207 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 RER1O15258 196 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 HMGN1P05114 100 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 SLC2A5P22732 501 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 APLNRP35414 380 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 GLRXP35754 106 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 POLR2IP36954 125 aaKnown RBP11.1□□□□□ -0.63
SSR4-211ENST00000486204 CDKN1AP38936 164 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 RPS27P42677 84 aaKnown RBP11.1□□□□□ -0.63
SSR4-211ENST00000486204 ATP5J2P56134 94 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 EFNB1P98172 346 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 EFNB3Q15768 340 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 PCK2Q16822 640 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 SWI5Q1ZZU3 235 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 AGAP6Q5VW22 663 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 PLBD1Q6P4A8 553 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 CORO6Q6QEF8 472 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 VHLLQ6RSH7 139 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 CFAP77Q6ZQR2 320 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.1□□□□□ -0.63
SSR4-211ENST00000486204 LINC00346Q8IVM7 164 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 ZNF101Q8IZC7 436 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 FBXL14Q8N1E6 418 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 ZNF511Q8NB15 262 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 RBM4BQ9BQ04 359 aaKnown RBP11.1□□□□□ -0.63
SSR4-211ENST00000486204 REG4Q9BYZ8 158 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 WDR76Q9H967 626 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 MARCH7Q9H992 704 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
SSR4-211ENST00000486204 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
SSR4-211ENST00000486204 TMEM129A0AVI4 362 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 C5orf49A4QMS7 147 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 ERICH4A6NGS2 130 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 PRR23D1E9PI22 279 aaPredicted RBP11.09□□□□□ -0.63
SSR4-211ENST00000486204 M0R129 80 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 KCNAB3O43448 404 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
SSR4-211ENST00000486204 FAM157BP0CG42 384 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 PRR23D2P0DMB1 279 aaPredicted RBP11.09□□□□□ -0.63
SSR4-211ENST00000486204 HTR5AP47898 357 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 ALDH3A2P51648 485 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 RAB35Q15286 201 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 CLEC12BQ2HXU8 276 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 RFPL4BQ6ZWI9 263 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 CBR4Q8N4T8 237 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 OR10H5Q8NGA6 315 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 OR10S1Q8NGN2 331 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 OR1J2Q8NGS2 313 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 OR6K6Q8NGW6 343 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 SLC7A6Q92536 515 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 STMN2Q93045 179 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 MAP6Q96JE9 813 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
SSR4-211ENST00000486204 TVP23BQ9NYZ1 205 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms