RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 GFRALQ6UXV0 394 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 SKA3Q8IX90 412 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 FGFBP3Q8TAT2 258 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 PPP1R14AQ96A00 147 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 PTTG2Q9NZH5 202 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
COL9A1-207ENST00000486080 SMG1Q96Q15 3661 aaKnown RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 A0A096LPE4 126 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 TRDV1A0A1B0GX56 115 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 A0A1W2PPZ6 126 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 MBD3L4A6NDZ8 208 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 MBD3L3A6NE82 208 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 MBD3L5A6NJ08 208 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 GABRPO00591 440 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 ZFPL1O95159 310 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 HLA-DPB1P04440 258 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 CST2P09228 141 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 KIR3DL2P43630 455 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 SF3B4Q15427 424 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 ODF4Q2M2E3 257 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 WDR38Q5JTN6 314 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 HIST2H3PS2Q5TEC6 136 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 FBXW9Q5XUX1 488 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 OR2A2Q6IF42 318 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 TFAP2EQ6VUC0 442 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 GDPGP1Q6ZNW5 385 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 HIST2H3AQ71DI3 136 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 MBD3L2Q8NHZ7 208 aaPredicted RBP12.65□□□□□ -0.38
COL9A1-207ENST00000486080 ABHD4Q8TB40 342 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 MALT1Q9UDY8 824 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 GTF2A1LQ9UNN4 478 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 SLC22A13Q9Y226 551 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 SLC5A6Q9Y289 635 aa12.65□□□□□ -0.38
COL9A1-207ENST00000486080 OR4C45A6NMZ5 311 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF254O75437 659 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 RGS9O75916 674 aaPredicted RBP12.65□□□□□ -0.39
COL9A1-207ENST00000486080 CD53P19397 219 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.39
COL9A1-207ENST00000486080 MRPL28Q13084 256 aaKnown RBP12.65□□□□□ -0.39
COL9A1-207ENST00000486080 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.39
COL9A1-207ENST00000486080 FDX2Q6P4F2 183 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 DEGS2Q6QHC5 323 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 RDH10Q8IZV5 341 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 GJC3Q8NFK1 279 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.39
COL9A1-207ENST00000486080 C4orf45Q96LM5 186 aa12.65□□□□□ -0.39
COL9A1-207ENST00000486080 PPIL3Q9H2H8 161 aaKnown RBP12.65□□□□□ -0.39
COL9A1-207ENST00000486080 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 HSPB2A8KAH6 182 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF878C9JN71 531 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 DOK2O60496 412 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 TNFSF13O75888 250 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 CD1AP06126 327 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 ITGA5P08648 1049 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF32P17041 273 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 FGF9P31371 208 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-207ENST00000486080 PTGER4P35408 488 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 MAGEB1P43366 347 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 SERPINB10P48595 397 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 PER3P56645 1201 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 TAF13Q15543 124 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 STK11Q15831 433 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 HSPB2Q16082 182 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 BTLAQ7Z6A9 289 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 CATSPERDQ86XM0 798 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 DOLPP1Q86YN1 238 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 NAXEQ8NCW5 288 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 R4GMQ9 66 aa12.64□□□□□ -0.39
COL9A1-207ENST00000486080 TMEM269A0A1B0GVZ9 245 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 H3BSH0 61 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 IL18BPO95998 194 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 FAM27D1Q5T7N8 215 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF774Q6NX45 483 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 PCSK4Q6UW60 755 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 USP43Q70EL4 1123 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF627Q7L945 461 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 CEACAM19Q7Z692 300 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 MS4A15Q8N5U1 240 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 OR6K3Q8NGY3 331 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 SLC7A6Q92536 515 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 STARD4Q96DR4 205 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 G6PC2Q9NQR9 355 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 GALNT8Q9NY28 637 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF224Q9NZL3 707 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 TINAGQ9UJW2 476 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF281Q9Y2X9 895 aa12.63□□□□□ -0.39
COL9A1-207ENST00000486080 PRRG2O14669 202 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms