RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 FUT5Q11128 374 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 TRMT5Q32P41 509 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC36A3Q495N2 470 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 GPAT3Q53EU6 434 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 PAGE3Q5JUK9 113 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 CCNJQ5T5M9 372 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 WLSQ5T9L3 541 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 TNFAIP8L2Q6P589 184 aaPredicted RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 CD164L2Q6UWJ8 174 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 APOOLQ6UXV4 268 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 HACD2Q6Y1H2 254 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 FRRS1Q6ZNA5 592 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 EIF3MQ7L2H7 374 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 ARPINQ7Z6K5 226 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 DHDDSQ86SQ9 333 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 MARCH3Q86UD3 253 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 IFNEQ86WN2 208 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 MED12LQ86YW9 2145 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC30A8Q8IWU4 369 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 CHERPQ8IWX8 916 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 ZNF440Q8IYI8 595 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 CLEC4FQ8N1N0 589 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 NPEPL1Q8NDH3 523 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 FAM83FQ8NEG4 500 aaPredicted RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 OR2M3Q8NG83 312 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 OR8J3Q8NGG0 315 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 FAM57AQ8TBR7 257 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 ZPLD1Q8TCW7 415 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 PHF10Q8WUB8 498 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 RAB8BQ92930 207 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 CMTM5Q96DZ9 223 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 DOCK7Q96N67 2140 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 HOPXQ9BPY8 73 aaPredicted RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 PIGQQ9BRB3 760 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 NMNAT2Q9BZQ4 307 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 LAT2Q9GZY6 243 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 DEFB127Q9H1M4 99 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC38A1Q9H2H9 487 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 RIMS4Q9H426 269 aaPredicted RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 KAT8Q9H7Z6 458 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 EVA1AQ9H8M9 152 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 EFCAB1Q9HAE3 211 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 A4GALTQ9NPC4 353 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 EXOSC3Q9NQT5 275 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 GID8Q9NWU2 228 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC25A37Q9NYZ2 338 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 PTTG2Q9NZH5 202 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 VAPAQ9P0L0 249 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 MRPS7Q9Y2R9 242 aaKnown RBP4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 ARL2BPQ9Y2Y0 163 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 AP4B1Q9Y6B7 739 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 KCNE3Q9Y6H6 103 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 DCHS2Q6V1P9 2916 aa4.86□□□□□ -1.63
NHLRC3-205ENST00000485407 MPDZO75970 2070 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 PKDREJQ9NTG1 2253 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 TRAV18A0A075B6X5 111 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 FAM166BA8MTA8 275 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 C5orf58C9J3I9 102 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 NPIPA2E9PIF3 369 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 NPIPA3F8WFD2 350 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 FAAHO00519 579 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 FBP2O00757 339 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 LANCL1O43813 399 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SCO2O43819 266 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 CDC40O60508 579 aaKnown RBP eCLIP4.85□□□□□ -1.639e-9■■■□□ 17.5
NHLRC3-205ENST00000485407 SERPINB7O75635 380 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 PDE9AO76083 593 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 H6PDO95479 791 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 FAM107AO95990 144 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 CH25HO95992 272 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SFTPBP07988 381 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 UQCRBP14927 111 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 CPN1P15169 458 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 B4GALT1P15291 398 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 RPS4Y1P22090 263 aaKnown RBP4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 PAICSP22234 425 aaKnown RBP4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 ELK4P28324 431 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC6A8P48029 635 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 ENTPD1P49961 510 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 MNAT1P51948 309 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 ZP1P60852 638 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 EEF1A1P68104 462 aaKnown RBP4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 CDK6Q00534 326 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC3A1Q07837 685 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SYPL1Q16563 259 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 GTDC1Q4AE62 458 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 TMEM41BQ5BJD5 291 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC25A53Q5H9E4 307 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SPATA46Q5T0L3 261 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 PDZK1Q5T2W1 519 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 EEF1A1P5Q5VTE0 462 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 ZNF770Q6IQ21 691 aaPredicted RBP4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 NANOGP8Q6NSW7 305 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 REEP3Q6NUK4 255 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 XKRXQ6PP77 449 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 CCBE1Q6UXH8 406 aaPredicted RBP4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 Q6ZSV7 163 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 SLC16A9Q7RTY1 509 aa4.85□□□□□ -1.63
NHLRC3-205ENST00000485407 NET1Q7Z628 596 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms