RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 M0R082 166 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 SEMA7AO75326 666 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 ZFAND5O76080 213 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 SLC35E2P0CK97 266 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 OTX1P32242 354 aaPredicted RBP4.65□□□□□ -1.66
CCDC39-205ENST00000485055 RASSF2P50749 326 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 RPL14P50914 215 aaKnown RBP4.65□□□□□ -1.66
CCDC39-205ENST00000485055 OR4D2P58180 307 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 LSM6P62312 80 aaKnown RBP4.65□□□□□ -1.66
CCDC39-205ENST00000485055 DLG1Q12959 904 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 ZNHIT3Q15649 155 aaPredicted RBP4.65□□□□□ -1.66
CCDC39-205ENST00000485055 IMPG1Q17R60 797 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 KRTAP21-3Q3LHN1 58 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 COX19Q49B96 90 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 MED27Q6P2C8 311 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 VWA1Q6PCB0 445 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 C3orf62Q6ZUJ4 267 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 TMPRSS11FQ6ZWK6 438 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 PARP16Q8N5Y8 322 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF417Q8TAU3 575 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 KCTD4Q8WVF5 259 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF587Q96SQ5 575 aaPredicted RBP4.65□□□□□ -1.66
CCDC39-205ENST00000485055 TRIM51Q9BSJ1 452 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 FUNDC2Q9BWH2 189 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 GPR173Q9NS66 373 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 GIN1Q9NXP7 522 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 CES1P1Q9UKY3 287 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 SLC6A5Q9Y345 797 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 POLR3HQ9Y535 204 aaPredicted RBP4.65□□□□□ -1.66
CCDC39-205ENST00000485055 CROCCQ5TZA2 2017 aa4.65□□□□□ -1.66
CCDC39-205ENST00000485055 ELOA3CA0A087WX78 387 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 ZC3H12DA2A288 527 aaKnown RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 MEGF11A6BM72 1044 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 ELOA3DA6NLF2 546 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 CCL24O00175 119 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 RDH16O75452 317 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 ETHE1O95571 254 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 TSPAN13O95857 204 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 HPXP02790 462 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 HOXB5P09067 269 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 HIST1H1TP22492 207 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 MAGEA5P43359 124 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 PGGT1BP53609 377 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 MLLT10P55197 1068 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 DNAJB13P59910 316 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 MRPS22P82650 360 aaKnown RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 TSNQ15631 228 aaKnown RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 ELOA3BQ3SY89 546 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 GLYR1Q49A26 553 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-205ENST00000485055 VASNQ6EMK4 673 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 OR4C11Q6IEV9 310 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 TRIM40Q6P9F5 258 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF836Q6ZNA1 936 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 PRSS41Q7RTY9 318 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 LDLRAD3Q86YD5 345 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 BEST3Q8N1M1 668 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 METTL4Q8N3J2 472 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 ELOA3Q8NG57 546 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 OR13C5Q8NGS8 318 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 RDH11Q8TC12 318 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 DYNC2LI1Q8TCX1 351 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 MZB1Q8WU39 189 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 DCAKDQ8WVC6 231 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 RAB39BQ96DA2 213 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 RNF170Q96K19 258 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 IL4I1Q96RQ9 567 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 IFT46Q9NQC8 304 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 TMED3Q9Y3Q3 217 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 GMPPBQ9Y5P6 360 aa4.65□□□□□ -1.67
CCDC39-205ENST00000485055 TRBV7-9A0A0J9YWB2 115 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 SMIM23A6NLE4 172 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CCRL2O00421 344 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 SLC19A2O60779 497 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 TCRBP04435 133 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 P04436 131 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ATP1B1P05026 303 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CCDC166P0CW27 439 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ZP3P21754 424 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ME2P23368 584 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PKNOX1P55347 436 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ERVK11-1P61568 191 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 TFF3Q07654 80 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OR1C1Q15619 314 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 VAMP3Q15836 100 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF74Q16587 644 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 NKPD1Q17RQ9 610 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 CR1LQ2VPA4 569 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PRR30Q53SZ7 412 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-205ENST00000485055 UTF1Q5T230 341 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 OPN5Q6U736 354 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 SYS1Q8N2H4 156 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 NPEPL1Q8NDH3 523 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 APH1AQ96BI3 265 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 MOCOSQ96EN8 888 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 COX4I2Q96KJ9 171 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 GFI1Q99684 422 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 ATF6BQ99941 703 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 PRRT1Q99946 306 aa4.64□□□□□ -1.67
CCDC39-205ENST00000485055 MRPL57Q9BQC6 102 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms