RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 IMP4Q96G21 291 aaKnown RBP3.08□□□□□ -1.92
FXN-204ENST00000484259 KIRREL1Q96J84 757 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 CAPZA3Q96KX2 299 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 MAGEB18Q96M61 343 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 ZNF641Q96N77 438 aaPredicted RBP3.08□□□□□ -1.92
FXN-204ENST00000484259 OR5M11Q96RB7 305 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 VAT1Q99536 393 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 VPS25Q9BRG1 176 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 CDCA4Q9BXL8 241 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 C5orf66Q9H5L9 145 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 ESRP2Q9H6T0 727 aaKnown RBP3.08□□□□□ -1.92
FXN-204ENST00000484259 RNF121Q9H920 327 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 GDF3Q9NR23 364 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 NPAP1Q9NZP6 1156 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 IL17CQ9P0M4 197 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 SLC9A2Q9UBY0 812 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 TCF19Q9Y242 345 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 MYRFQ9Y2G1 1151 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 KLHDC2Q9Y2U9 406 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 NSG2Q9Y328 171 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 SNX24Q9Y343 169 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 RPL36Q9Y3U8 105 aaKnown RBP3.08□□□□□ -1.92
FXN-204ENST00000484259 LOXL2Q9Y4K0 774 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 BCL9O00512 1426 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 ASXL1Q8IXJ9 1541 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 ADGRB1O14514 1584 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 AHDC1Q5TGY3 1603 aaPredicted RBP3.08□□□□□ -1.92
FXN-204ENST00000484259 KIF1AQ12756 1690 aa3.08□□□□□ -1.92
FXN-204ENST00000484259 NALCNQ8IZF0 1738 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ZCWPW2A0A1B0GU75 182 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ZC3H12DA2A288 527 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 FAM74A7A6NL05 159 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 CLDN24A6NM45 220 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 LMO7DNF2Z398 122 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TRAPPC2LH3BP13 241 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 C15orf65H3BRN8 121 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 H3BS24 57 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 PLPP1O14494 284 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 DVL1O14640 695 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 RGS14O43566 566 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 SYNGR1O43759 233 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 PDE6DO43924 150 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 MPZL2O60487 215 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ALOX12BO75342 701 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 MPDU1O75352 247 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 WISP1O95388 367 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 CCNE2O96020 404 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 RPLP0P05388 317 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 BPGMP07738 259 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 NGFRP08138 427 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 HTR1AP08908 422 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TSPAN19P0C672 248 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 METTL15P1P0C7V9 234 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 LIMS3P0CW19 117 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 LIMS4P0CW20 117 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 UNGP13051 313 aaPredicted RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 MGMTP16455 207 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ZNF17P17021 662 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 HIST1H1TP22492 207 aaPredicted RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 CXCR1P25024 350 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 RPS12P25398 132 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 FGF9P31371 208 aaPredicted RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 CCKARP32238 428 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 QARSP47897 775 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 ZNF84P51523 738 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 AKR1D1P51857 326 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 EFNA3P52797 238 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 LBX1P52954 281 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TPTEP56180 551 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 CTSWP56202 376 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TMPRSS3P57727 454 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 DNAJB13P59910 316 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 RPS20P60866 119 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 RAB8AP61006 207 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 WDR5P61964 334 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 GNG3P63215 75 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 EMX2Q04743 252 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ZNF91Q05481 1191 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 BCL2L1Q07817 233 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 MFGE8Q08431 387 aaPredicted RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 ST3GAL1Q11201 340 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TWF1Q12792 350 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 SKP2Q13309 424 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 BIKQ13323 160 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 OR2F1Q13607 317 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ZNF235Q14590 738 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 ABRAXAS2Q15018 415 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 OR1Q1Q15612 314 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TRIP13Q15645 432 aaPredicted RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 KCNJ8Q15842 424 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 HIST3H3Q16695 136 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TRMT5Q32P41 509 aaKnown RBP3.07□□□□□ -1.92
FXN-204ENST00000484259 SLC25A52Q3SY17 297 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 SLC9C1Q4G0N8 1177 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 SYTL3Q4VX76 610 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 FAM74A3Q4VXF1 159 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TIGD2Q4W5G0 525 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 TP53I3Q53FA7 332 aa3.07□□□□□ -1.92
FXN-204ENST00000484259 HIST2H3PS2Q5TEC6 136 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms