RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ABOP16442 354 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 GPR3P46089 330 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 SKP2Q13309 424 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 HSPB2Q16082 182 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 ZSCAN1Q8NBB4 408 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 OR4D6Q8NGJ1 314 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 ROBO4Q8WZ75 1007 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 AQP3Q92482 292 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 DCUN1D4Q92564 292 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 CPNE2Q96FN4 548 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 PRRT1Q99946 306 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 KXD1Q9BQD3 176 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 CHMP1AQ9HD42 196 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 FAM60AQ9NP50 221 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 ZNF107Q9UII5 783 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 CLDN16Q9Y5I7 305 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 C11orf98E9PRG8 122 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 PHYHO14832 338 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 GMFGO60234 142 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 WISP1O95388 367 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 SPARCP09486 303 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 TPT1P13693 172 aaKnown RBP17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 NOGQ13253 232 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 MEF2DQ14814 521 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 RTN4RL2Q86UN3 420 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 ZSCAN4Q8NAM6 433 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 BHLHE23Q8NDY6 225 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 OR10R2Q8NGX6 335 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 PHOSPHO1Q8TCT1 267 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 C8orf44Q96CB5 159 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 ZNF587Q96SQ5 575 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 MICU1Q9BPX6 476 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 SEC11CQ9BY50 192 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 SLC22A11Q9NSA0 550 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 C5orf51A6NDU8 294 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 LINC00587B1AMM8 73 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 STK17BO94768 372 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 GDI1P31150 447 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 SERPINF1P36955 418 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 TRAPPC6BQ86SZ2 158 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 CATSPERDQ86XM0 798 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 RNF141Q8WVD5 230 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 THRSPQ92748 146 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 ELSPBP1Q96BH3 223 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 TRIM43Q96BQ3 446 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 RNF208Q9H0X6 261 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 CKLFQ9UBR5 152 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 A0A0A6YYC8 382 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 I3L1I5 382 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 AIMP2Q13155 320 aaKnown RBP17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 EIF2B1Q14232 305 aaKnown RBP17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 GFOD2Q3B7J2 385 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 ZNF260Q3ZCT1 412 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 TANGO2Q6ICL3 276 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 NUDCD2Q8WVJ2 157 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 MMP26Q9NRE1 261 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 RHBDD3Q9Y3P4 386 aa17.72■□□□□ 0.43
RPUSD3-216ENST00000484134 REV3LO60673 3130 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 MSGN1A6NI15 193 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 DBX1A6NMT0 343 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 C17orf51A8MQB3 221 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 RAB27BO00194 218 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 PTGFRP43088 359 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 ARRB1P49407 418 aaPredicted RBP17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 NR0B1P51843 470 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 SEC13P55735 322 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 SMAD2Q15796 467 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 SWI5Q1ZZU3 235 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 MED25Q71SY5 747 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 TAF8Q7Z7C8 310 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 MARCH3Q86UD3 253 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 ZDHHC22Q8N966 263 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 CRB3Q9BUF7 120 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 OR10A5Q9H207 317 aa17.71■□□□□ 0.43
RPUSD3-216ENST00000484134 TRBV6-7A0A0A0MS04 114 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 COLCA2A8K830 154 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 ZNF705EA8MWA4 302 aaPredicted RBP17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 HEXAP06865 529 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 HRH1P35367 487 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 POMZP3Q6PJE2 187 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 PGAP1Q75T13 922 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 LYPD6Q86Y78 171 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 ZNF440Q8IYI8 595 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 NANPQ8TBE9 248 aa17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 DHCR7Q9UBM7 475 aaKnown RBP17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 GDF2Q9UK05 429 aaPredicted RBP17.71■□□□□ 0.42
RPUSD3-216ENST00000484134 FARS2O95363 451 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 IFNA4P05014 189 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 CD2P06729 351 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 MUC1P15941 1255 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 FSTP19883 344 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 MAOAP21397 527 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 ROM1Q03395 351 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 PJVKQ0ZLH3 352 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 RUNX3Q13761 415 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 ZNF776Q68DI1 518 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 SLC18B1Q6NT16 456 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 ARHGEF39Q8N4T4 335 aa17.7■□□□□ 0.42
RPUSD3-216ENST00000484134 FAM160A2Q8N612 972 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms