RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR5K1Q8NHB7 308 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 C10orf105Q8TEF2 133 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 MARS2Q96GW9 593 aaKnown RBP15.43■□□□□ 0.06
HDAC6-225ENST00000483506 DCLRE1CQ96SD1 692 aaKnown RBP15.43■□□□□ 0.06
HDAC6-225ENST00000483506 COQ7Q99807 217 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 RHNO1Q9BSD3 238 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 HDHD2Q9H0R4 259 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 OR51B6Q9H340 312 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 ELOVL3Q9HB03 270 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 TUBG2Q9NRH3 451 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 TBCCD1Q9NVR7 557 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 SLCO1C1Q9NYB5 712 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 FZR1Q9UM11 496 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 POLR1DQ9Y2S0 133 aa15.43■□□□□ 0.06
HDAC6-225ENST00000483506 ZFHX3Q15911 3703 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 RIIAD1A6NNX1 92 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 J3QW42 95 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 NDUFS8O00217 210 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 EBAG9O00559 213 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 LY6HO94772 140 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 CLPTM1O96005 669 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 ADRA2AP08913 450 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 ZNF3P17036 446 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 FASP25445 335 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 PYCR1P32322 319 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 SELENOVP59797 346 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 PARP8Q8N3A8 854 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 IQCF1Q8N6M8 205 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 PROKR2Q8NFJ6 384 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 ABHD4Q8TB40 342 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 ZNRF4Q8WWF5 429 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 IPCEF1Q8WWN9 437 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-225ENST00000483506 FAM168AQ92567 244 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 GSX1Q9H4S2 264 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-225ENST00000483506 DUSP13Q9UII6 198 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 NF1P21359 2839 aa15.42■□□□□ 0.06
HDAC6-225ENST00000483506 A0A1W2PPW3 197 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 VWC2LB2RUY7 222 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 RNF223E7ERA6 249 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ABHD16AO95870 558 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 NGFP01138 241 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 SLC25A16P16260 332 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 SPI1P17947 270 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ALDH3B1P43353 468 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ACTR3P61158 418 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 PPP1CBP62140 327 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 CDK5Q00535 292 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 PCK2Q16822 640 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ELFN2Q5R3F8 820 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ACSM5Q6NUN0 579 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 HIPK1Q86Z02 1210 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ZCCHC24Q8N2G6 241 aaKnown RBP15.41■□□□□ 0.06
HDAC6-225ENST00000483506 ATG16L2Q8NAA4 619 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 OR9Q1Q8NGQ5 310 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 SLC25A40Q8TBP6 338 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 GABARAPL1Q9H0R8 117 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 SLC25A19Q9HC21 320 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 PNRC2Q9NPJ4 139 aaKnown RBP15.41■□□□□ 0.06
HDAC6-225ENST00000483506 GPR160Q9UJ42 338 aa15.41■□□□□ 0.06
HDAC6-225ENST00000483506 LOC390937A0A1W2PQ73 354 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 SMAD7O15105 426 aaKnown RBP15.4■□□□□ 0.06
HDAC6-225ENST00000483506 HLA-DQA2P01906 255 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 PDLIM4P50479 330 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 DAPP51397 102 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 BLVRAP53004 296 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 GINS1Q14691 196 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 MAD2L1BPQ15013 274 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-225ENST00000483506 MOGQ16653 247 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 ZNF718Q3SXZ3 478 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 TMEM255AQ5JRV8 349 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 LINC01590Q5TEZ4 76 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 CORO6Q6QEF8 472 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 CFAP77Q6ZQR2 320 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 KLF14Q8TD94 323 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-225ENST00000483506 SLC7A6Q92536 515 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 COG8Q96MW5 612 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 SMR3AQ99954 134 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 OR2J1Q9GZK6 312 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 PAPOLBQ9NRJ5 636 aaKnown RBP15.4■□□□□ 0.06
HDAC6-225ENST00000483506 TAAR3PQ9P1P4 343 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 COMMD3-BMI1R4GMX3 469 aa15.4■□□□□ 0.06
HDAC6-225ENST00000483506 SURF4O15260 269 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 HMGN1P05114 100 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 HEXAP06865 529 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF823P16415 610 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 GIFP27352 417 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 POU1F1P28069 291 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 GCH1P30793 250 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 FMO3P31513 532 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 MPV17P39210 176 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 RGS6P49758 472 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 ECH1Q13011 328 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 NKPD1Q17RQ9 610 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 RSPO1Q2MKA7 263 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-225ENST00000483506 TEX30Q5JUR7 227 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 SPATA46Q5T0L3 261 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-225ENST00000483506 LINC00346Q8IVM7 164 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF786Q8N393 782 aa15.39■□□□□ 0.05
HDAC6-225ENST00000483506 ICA1LQ8NDH6 482 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms