RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 UMPSP11172 480 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 CCL2P13500 99 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ADRA2CP18825 462 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 AQP1P29972 269 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 GCH1P30793 250 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 APLNRP35414 380 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF81P51508 661 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF84P51523 738 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF134P52741 427 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 CDH12P55289 794 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 LOXL3P58215 753 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 UBA52P62987 128 aaKnown RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 HSF2Q03933 536 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZP4Q12836 540 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZIK1Q3SY52 487 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 TNFAIP8L3Q5GJ75 292 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF613Q6PF04 617 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 TTC33Q6PID6 262 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 NHLRC1Q6VVB1 395 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 WDR88Q6ZMY6 472 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 HDDC2Q7Z4H3 204 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 KCTD20Q7Z5Y7 419 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 COMTD1Q86VU5 262 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ARMC8Q8IUR7 673 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF584Q8IVC4 421 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 CCDC28AQ8IWP9 274 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 PAQR4Q8N4S7 273 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 OR4K5Q8NGD3 323 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 OR1J1Q8NGS3 322 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 FGFBP3Q8TAT2 258 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ST7LQ8TDW4 575 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 CCL17Q92583 94 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 TSPAN32Q96QS1 320 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 OR52B2Q96RD2 323 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 DCLRE1CQ96SD1 692 aaKnown RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 MCHR1Q99705 422 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 SH3GL3Q99963 347 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF747Q9BV97 191 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 EGLN1Q9GZT9 426 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 PCDHAC1Q9H158 963 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 KCNN2Q9H2S1 579 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 TMEM38AQ9H6F2 299 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 SLCO1B3Q9NPD5 702 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 TCF7L2Q9NQB0 619 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 NANSQ9NR45 359 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 NKIRAS1Q9NYS0 192 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 UBAP1Q9NZ09 502 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 EIF3KQ9UBQ5 218 aaKnown RBP4.98□□□□□ -1.61
CSDE1-207ENST00000483407 ANGPT4Q9Y264 503 aa4.98□□□□□ -1.61
CSDE1-207ENST00000483407 PPIAL4EA0A075B759 164 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 PPIAL4CA0A0B4J2A2 164 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 CENPBD1B2RD01 187 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 MCIDASD6RGH6 385 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 PPIAL4DF5H284 164 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 POLR3GO15318 223 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-207ENST00000483407 KCNAB3O43448 404 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 SPRY3O43610 288 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 TPST2O60704 377 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 FOXH1O75593 365 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 MFN2O95140 757 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 CH25HO95992 272 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 IGHV3-13P01766 116 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 PGA4P0DJD7 388 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 PGA3P0DJD8 388 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 PPIAL4FP0DN26 164 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 HKR1P10072 659 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 NR2C1P13056 603 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 CCNOP22674 350 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 LIPAP38571 399 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ATP4BP51164 291 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ERVS71-1P61550 626 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 GLO1Q04760 184 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 MELKQ14680 651 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF74Q16587 644 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF718Q3SXZ3 478 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ARMCX4Q5H9R4 360 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 LIN54Q6MZP7 749 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 Q6ZRM9 215 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 NANOGNBQ7Z5D8 188 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 WDFY1Q8IWB7 410 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 C1orf174Q8IYL3 243 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 LRRC18Q8N456 261 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ZDHHC22Q8N966 263 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 SMYD1Q8NB12 490 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 C11orf65Q8NCR3 313 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 C22orf15Q8WYQ4 148 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 POP5Q969H6 163 aaKnown RBP4.97□□□□□ -1.61
CSDE1-207ENST00000483407 MCHR2Q969V1 340 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 SPDL1Q96EA4 605 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 MPP4Q96JB8 637 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 GPA33Q99795 319 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 SLC19A3Q9BZV2 496 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF696Q9H7X3 374 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 CCNB1IP1Q9NPC3 277 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 ESM1Q9NQ30 184 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 CYSLTR2Q9NS75 346 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 SLC25A37Q9NYZ2 338 aa4.97□□□□□ -1.61
CSDE1-207ENST00000483407 CCDC167Q9P0B6 97 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms