RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SNRPBP14678 240 aaKnown RBP17.27■□□□□ 0.35
CCM2-214ENST00000481194 OR51E1Q8TCB6 317 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 PSMF1Q92530 271 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 UGT2A1Q9Y4X1 527 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 TRAV1-2A0A0B4J238 106 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 DBHP09172 617 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 B4GALT1P15291 398 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 SOX8P57073 446 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 CORO6Q6QEF8 472 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 OR1F12Q8NHA8 337 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 ADGRL4Q9HBW9 690 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 ZFP36L1Q07352 338 aaKnown RBP17.26■□□□□ 0.35
CCM2-214ENST00000481194 THSD4Q6ZMP0 1018 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 ZNF687Q8N1G0 1237 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 MCHR2Q969V1 340 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 JAM3Q9BX67 310 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 NDRG3Q9UGV2 375 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 OR6C68A6NDL8 312 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 ZNF286AQ9HBT8 521 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 FOXJ3Q9UPW0 622 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 TRGV8A0A0C4DH27 118 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 CRYAAP02489 173 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 COX15Q7KZN9 410 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 APOBEC3DQ96AK3 386 aaPredicted RBP17.26■□□□□ 0.35
CCM2-214ENST00000481194 RAB3CQ96E17 227 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 CRLF2Q9HC73 371 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 FBXL2Q9UKC9 423 aa17.26■□□□□ 0.35
CCM2-214ENST00000481194 CROCCQ5TZA2 2017 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 GPX5O75715 221 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 DRAM2Q6UX65 266 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 TRAPPC6BQ86SZ2 158 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 TEX46H3BTG2 121 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 ZNF44P15621 663 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 AICDAQ9GZX7 198 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 HELZP42694 1942 aaKnown RBP17.25■□□□□ 0.35
CCM2-214ENST00000481194 CTDSP2O14595 271 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 GLSO94925 669 aaPredicted RBP17.25■□□□□ 0.35
CCM2-214ENST00000481194 RBP2P50120 134 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 SWI5Q1ZZU3 235 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 HSD17B8Q92506 261 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 REEP6Q96HR9 211 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 LIN7BQ9HAP6 207 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 ZFP57Q9NU63 452 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 MYEF2Q9P2K5 600 aaKnown RBP17.25■□□□□ 0.35
CCM2-214ENST00000481194 ANKRD33BA6NCL7 494 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 E9PI62 339 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 LPLP06858 475 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 ETV6P41212 452 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 CDKN2AP42771 156 aaKnown RBP17.25■□□□□ 0.35
CCM2-214ENST00000481194 KIR2DL3P43628 341 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 ADAM19Q9H013 955 aa17.25■□□□□ 0.35
CCM2-214ENST00000481194 KANTRA0A1W2PQU2 76 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 FCER2P06734 321 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 THBS4P35443 961 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 TBC1D15Q8TC07 691 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 RNF128Q8TEB7 428 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 ITFG2Q969R8 447 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 GPR84Q9NQS5 396 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 TAS2R4Q9NYW5 299 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 C5orf49A4QMS7 147 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 MCRIP1C9JLW8 97 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 TIAF1O95411 115 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 CD96P40200 585 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 CCR9P51686 369 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 GLYATL3Q5SZD4 288 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 KCTD9Q7L273 389 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 ZNF611Q8N823 705 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 ACBD4Q8NC06 268 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 CASTOR1Q8WTX7 329 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 TXNDC15Q96J42 360 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 ALKBH3Q96Q83 286 aaPredicted RBP17.24■□□□□ 0.35
CCM2-214ENST00000481194 EGLN1Q9GZT9 426 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 GHRLQ9UBU3 117 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 POLDIP2Q9Y2S7 368 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 LRRC30A6NM36 301 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 GCM2O75603 506 aaPredicted RBP17.24■□□□□ 0.35
CCM2-214ENST00000481194 MAGEA5P43359 124 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 TMPRSS3P57727 454 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 FGL1Q08830 312 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 METTL11BQ5VVY1 283 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 CMTM1Q8IZ96 169 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 APH1BQ8WW43 257 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 CMSS1Q9BQ75 279 aaKnown RBP17.24■□□□□ 0.35
CCM2-214ENST00000481194 TTTY12Q9BZ98 90 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 NUDT15Q9NV35 164 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 RPS19P39019 145 aaKnown RBP17.24■□□□□ 0.35
CCM2-214ENST00000481194 FXYD6P3P58550 94 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 ENY2Q9NPA8 101 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 RHBDD3Q9Y3P4 386 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 LRP12Q9Y561 859 aa17.24■□□□□ 0.35
CCM2-214ENST00000481194 AIPO00170 330 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 HOXD4P09016 255 aaPredicted RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 LSM6P62312 80 aaKnown RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 POLE4Q9NR33 117 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 ZNF16P17020 682 aaPredicted RBP17.23■□□□□ 0.35
CCM2-214ENST00000481194 GNRHRP30968 328 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 GSG1Q2KHT4 349 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 CLVS2Q5SYC1 327 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 BEND4Q6ZU67 534 aa17.23■□□□□ 0.35
CCM2-214ENST00000481194 PRSS27Q9BQR3 290 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms