RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
LIMS3-203ENST00000480744 FAM156AQ8NDB6 213 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 SLC7A13Q8TCU3 470 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 CMBLQ96DG6 245 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 JMJD8Q96S16 334 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 SLC6A7Q99884 636 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 WACQ9BTA9 647 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 SUCNR1Q9BXA5 334 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 SYT4Q9H2B2 425 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 ANKRD19PQ9H560 264 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 ASH2LQ9UBL3 628 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 RPS6KA6Q9UK32 745 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 COA3Q9Y2R0 106 aaPredicted RBP12.89□□□□□ -0.35
LIMS3-203ENST00000480744 POLR1DQ9Y2S0 133 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 STARD10Q9Y365 291 aa12.89□□□□□ -0.35
LIMS3-203ENST00000480744 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 NDUFAB1O14561 156 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 IMPA2O14732 288 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 AHCYL1O43865 530 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 TNFRSF1AP19438 455 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 GATA3P23771 443 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 CFPP27918 469 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 PRDX6P30041 224 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 SDHAP31040 664 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 CENPAP49450 140 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 GPR139Q6DWJ6 353 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 Q6ZR03 302 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 TSEN54Q7Z6J9 526 aaKnown RBP12.88□□□□□ -0.35
LIMS3-203ENST00000480744 GLB1L2Q8IW92 636 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 OR5AS1Q8N127 324 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 C22orf15Q8WYQ4 148 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
LIMS3-203ENST00000480744 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
LIMS3-203ENST00000480744 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 EGFL7Q9UHF1 273 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 AURKCQ9UQB9 309 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
LIMS3-203ENST00000480744 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 FOXH1O75593 365 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 DIRAS1O95057 198 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 KITLGP21583 273 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 TUBG1P23258 451 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 ERFP50548 548 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 PSME3P61289 254 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 HACD2Q6Y1H2 254 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 USP43Q70EL4 1123 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 SPICQ8N5J4 248 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 FITM2Q8N6M3 262 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 OR52J3Q8NH60 311 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 OR1F12Q8NHA8 337 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 ITLN1Q8WWA0 313 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 CMTM5Q96DZ9 223 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 COG8Q96MW5 612 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 RBM4Q9BWF3 364 aaKnown RBP12.87□□□□□ -0.35
LIMS3-203ENST00000480744 NRIP3Q9NQ35 241 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 PTTG3PQ9NZH4 202 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 PPP1R3CQ9UQK1 317 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 V9GYQ6 96 aa12.87□□□□□ -0.35
LIMS3-203ENST00000480744 DOCK11Q5JSL3 2073 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 A0A1W2PRQ8 180 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 RER1O15258 196 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 SURF4O15260 269 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 PTP4A3O75365 173 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 GMNNO75496 209 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 DCTN3O75935 186 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 GPANK1O95872 356 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 DBHP09172 617 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 ZFP36P26651 326 aaKnown RBP12.86□□□□□ -0.35
LIMS3-203ENST00000480744 LIMS1P48059 325 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 RPS6KA3P51812 740 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 LSM6P62312 80 aaKnown RBP12.86□□□□□ -0.35
LIMS3-203ENST00000480744 BTG1P62324 171 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 DGCR6Q14129 220 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 KRT72Q14CN4 511 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 CCDC92Q53HC0 331 aaPredicted RBP12.86□□□□□ -0.35
LIMS3-203ENST00000480744 GLYATQ6IB77 296 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 PTCHD4Q6ZW05 846 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 ADCK1Q86TW2 530 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 KLHL36Q8N4N3 616 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 C3orf56Q8N813 242 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 ATG16L2Q8NAA4 619 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 PTP4A1Q93096 173 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 SAMD8Q96LT4 415 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 OR2V2Q96R30 315 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 NUAK2Q9H093 628 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 KRCC1Q9NPI7 259 aaPredicted RBP12.86□□□□□ -0.35
LIMS3-203ENST00000480744 ADA2Q9NZK5 511 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 VSX1Q9NZR4 365 aaPredicted RBP12.86□□□□□ -0.35
LIMS3-203ENST00000480744 NDUFAF4Q9P032 175 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 OPN4Q9UHM6 478 aa12.86□□□□□ -0.35
LIMS3-203ENST00000480744 OR6C6A6NF89 314 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms