RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CDH24Q86UP0 819 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 LINC00346Q8IVM7 164 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 GALNT4Q8N4A0 578 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 PAQR4Q8N4S7 273 aaPredicted RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 SMAP2Q8WU79 429 aaPredicted RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 IPCEF1Q8WWN9 437 aaPredicted RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 ZMYND19Q96E35 227 aaPredicted RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 IL4I1Q96RQ9 567 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 DCLRE1CQ96SD1 692 aaKnown RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 FAM118AQ9NWS6 357 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 IMPAD1Q9NX62 359 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 LOC100130705A0A1B0GUX0 176 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 CCDC182A6NF36 153 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 SLC22A31A6NKX4 558 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 ATE1O95260 518 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 SPARCP09486 303 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 PSKH1P11801 424 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 CCL2P13500 99 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 APOBEC3AP31941 199 aaPredicted RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 TTKP33981 857 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 GLRXP35754 106 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 SNRPGP62308 76 aaKnown RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 SNTB2Q13425 540 aaKnown RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 KRT80Q6KB66 452 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 UNQ6126/PRO20091Q6UXV3 157 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 SHFQ7M4L6 423 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 DTX2Q86UW9 622 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 ERI1Q8IV48 349 aaKnown RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 C1orf174Q8IYL3 243 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 MAP6Q96JE9 813 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 BCL2L14Q9BZR8 327 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 VCXQ9H320 206 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 PNRC2Q9NPJ4 139 aaKnown RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 DDX28Q9NUL7 540 aaKnown RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 HAO2Q9NYQ3 351 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 H2AFY2Q9P0M6 372 aaPredicted RBP17.04■□□□□ 0.32
LIME1-205ENST00000480139 GMPPBQ9Y5P6 360 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 DSCAMO60469 2012 aa17.04■□□□□ 0.32
LIME1-205ENST00000480139 NOTCH2Q04721 2471 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 CD53P19397 219 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 RAD52P43351 418 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 FABP6P51161 128 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 UCP2P55851 309 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 TMED1Q13445 227 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 KRTAP27-1Q3LI81 207 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 AGAP6Q5VW22 663 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 ARL9Q6T311 187 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 RHOUQ7L0Q8 258 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 DCXRQ7Z4W1 244 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 FBXL14Q8N1E6 418 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 ZNF454Q8N9F8 522 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 ZNF555Q8NEP9 628 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 OR6N2Q8NGY6 317 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 ST7LQ8TDW4 575 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 TMEM171Q8WVE6 324 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 PIGTQ969N2 578 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 MBD6Q96DN6 1003 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 CCL19Q99731 98 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 ATF6BQ99941 703 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 EIF3KQ9UBQ5 218 aaKnown RBP17.03■□□□□ 0.32
LIME1-205ENST00000480139 AKAP6Q13023 2319 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 NAV2Q8IVL1 2488 aa17.03■□□□□ 0.32
LIME1-205ENST00000480139 CYSRT1A8MQ03 144 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 VSTM5A8MXK1 200 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 J3QW42 95 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 MPZL2O60487 215 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 CCNOP22674 350 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 DNASE1P24855 282 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 THBS4P35443 961 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 WNT5AP41221 380 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 RPS27P42677 84 aaKnown RBP17.02■□□□□ 0.32
LIME1-205ENST00000480139 EFNB3Q15768 340 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 ADIPOQQ15848 244 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 MEDAGQ5VYS4 303 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 SLC16A9Q7RTY1 509 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 DPY19L4Q7Z388 723 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 BCDIN3DQ7Z5W3 292 aaKnown RBP17.02■□□□□ 0.32
LIME1-205ENST00000480139 MUC15Q8N387 334 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 OR10S1Q8NGN2 331 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 OTOSQ8NHW6 89 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 RFKQ969G6 155 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 TRAF4Q9BUZ4 470 aaPredicted RBP17.02■□□□□ 0.32
LIME1-205ENST00000480139 CBLN4Q9NTU7 201 aa17.02■□□□□ 0.32
LIME1-205ENST00000480139 WARS2Q9UGM6 360 aaKnown RBP17.02■□□□□ 0.32
LIME1-205ENST00000480139 CSMD2Q7Z408 3487 aa17.02■□□□□ 0.31
LIME1-205ENST00000480139 SELENOFO60613 162 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 SMPD2O60906 423 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 SOD3P08294 240 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 HTR1FP30939 366 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 OCLNQ16625 522 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 TTC23Q5W5X9 447 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 C11orf71Q6IPW1 123 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 C4orf45Q96LM5 186 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 ZNF582Q96NG8 517 aaPredicted RBP17.01■□□□□ 0.31
LIME1-205ENST00000480139 APOL4Q9BPW4 351 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 YIPF3Q9GZM5 350 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 ELOVL3Q9HB03 270 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 TBCCD1Q9NVR7 557 aa17.01■□□□□ 0.31
LIME1-205ENST00000480139 PLEKHA6Q9Y2H5 1048 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms