RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 IRF3Q14653 427 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 C4orf17Q53FE4 359 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 MRM1Q6IN84 353 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 C8orf82Q6P1X6 216 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 MED25Q71SY5 747 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF610Q8N9Z0 462 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 HHIPL1Q96JK4 782 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 C4orf45Q96LM5 186 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ATF6BQ99941 703 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SLC23A1Q9UHI7 598 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 EMC9Q9Y3B6 208 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PEAK1Q9H792 1746 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF732B4DXR9 585 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PHF1O43189 567 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 UTS2O95399 124 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 CLDN1O95832 211 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PCMT1P22061 227 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 FOLR3P41439 243 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 RPS23P62266 143 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ADIRFQ15847 76 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ATP6V1FQ16864 119 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ABI3BPQ7Z7G0 1075 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 DND1Q8IYX4 353 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 Q8N9G6 341 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ZBTB44Q8NCP5 570 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 MORN4Q8NDC4 146 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ARRDC3Q96B67 414 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SLC35B3Q9H1N7 401 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 FN3KRPQ9HA64 309 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SERTAD4Q9NUC0 356 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF225Q9UK10 706 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 CSAG2Q9Y5P2 127 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 WSB1Q9Y6I7 421 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 COL14A1Q05707 1796 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 FITM1A5D6W6 292 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 H3BML4 177 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SIX6O95475 246 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 GJA4P35212 333 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 HTR5AP47898 357 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 MEOX2P50222 304 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 C1orf61Q13536 156 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 EXT1Q16394 746 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ACKR1Q16570 336 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 TMEM176BQ3YBM2 270 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PLCXD3Q63HM9 321 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 RPUSD3Q6P087 351 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 CISD2Q8N5K1 135 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 OR10P1Q8NGE3 313 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 OR4C16Q8NGL9 310 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 TVP23CQ96ET8 276 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SMIM7Q9BQ49 75 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SORBS1Q9BX66 1292 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 OR51I2Q9H344 312 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 CHST11Q9NPF2 352 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 EXOGQ9Y2C4 368 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 MYH11P35749 1972 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 hCG_1809904A0A1W2PP81 198 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 A0A1W2PPE2 198 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 A0A1W2PR48 441 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 A0A1W2PR64 198 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 A0A1W2PRV1 198 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 FAM74A7A6NL05 159 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 TMPRSS11DO60235 418 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 CD3DP04234 171 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 INHBBP09529 407 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 CCL5P13501 91 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 ALOX5APP20292 161 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 CRYBB2P43320 205 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 OR2B8PP59922 312 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 IL13RA2Q14627 380 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 BEX5Q5H9J7 111 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 FAM69BQ5VUD6 431 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF626Q68DY1 528 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 JMJD6Q6NYC1 403 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 OGFOD3Q6PK18 319 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 Q6ZSR6 202 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 ESPNLQ6ZVH7 1005 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 PNPLA1Q8N8W4 532 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 SLC2A9Q9NRM0 540 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 LIN7CQ9NUP9 197 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 UBR1Q8IWV7 1749 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 TMEM235A6NFC5 223 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 RNASEK-C17orf49H0YIS7 233 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 CA11O75493 328 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 GABRR1P24046 479 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 THBS4P35443 961 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 SHBQ15464 509 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 NKG7Q16617 165 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF836Q6ZNA1 936 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 DBX2Q6ZNG2 339 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 FAM57BQ71RH2 274 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 RHOUQ7L0Q8 258 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 Q8IYB0 196 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 BPIFCQ8NFQ6 507 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 SECTM1Q8WVN6 248 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 MAP3K3Q99759 626 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 CTDSP1Q9GZU7 261 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 FGF21Q9NSA1 209 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 SIGLEC7Q9Y286 467 aa5.6□□□□□ -1.51
PRPF4B-205ENST00000480058 TIMM10BQ9Y5J6 103 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms