RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 LMF2Q9BU23 707 aaKnown RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 OR10A5Q9H207 317 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 A0A087WZY1 265 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 FAM221AA4D161 298 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 ZNF705FA8MVS1 300 aaPredicted RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 ZNF705DP0CH99 300 aaPredicted RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 ZNF705BP0CI00 300 aaPredicted RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 KIR2DS3Q14952 304 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 RSU1Q15404 277 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 FBXW12Q6X9E4 464 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 RASGRP3Q8IV61 690 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 PUSL1Q8N0Z8 303 aaKnown RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 ARIH2OSQ8N7S6 290 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 MIOXQ9UGB7 285 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 MRPS28Q9Y2Q9 187 aaKnown RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 WIF1Q9Y5W5 379 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 RAD51DO75771 328 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 SFTA3P0C7M3 94 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 HSD11B2P80365 405 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 TMEM255AQ5JRV8 349 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 ZNF660Q6AZW8 331 aaPredicted RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 TMEM234Q8WY98 164 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 FGF13Q92913 245 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 EXOSC3Q9NQT5 275 aaKnown RBP12.26□□□□□ -0.45
USP42-206ENST00000479544 OR52A1Q9UKL2 312 aa12.26□□□□□ -0.45
USP42-206ENST00000479544 IFNA2P01563 188 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 CDKN2AP42771 156 aaKnown RBP12.25□□□□□ -0.45
USP42-206ENST00000479544 RAB5CP51148 216 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
USP42-206ENST00000479544 PRR18Q8N4B5 295 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 GPR119Q8TDV5 335 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 NELFAQ9H3P2 528 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 PPP1R2P9O14990 202 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 HLA-DQB1P01920 261 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 ZGLP1P0C6A0 271 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 RPA2P15927 270 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 CHATP28329 748 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 CASRP41180 1078 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 H2BFSP57053 126 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 ACKR1Q16570 336 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 C19orf48Q6RUI8 117 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 HPSE2Q8WWQ2 592 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 B9D1Q9UPM9 204 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 RNASEK-C17orf49H0YIS7 233 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 CTAG2O75638 210 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 FCGR2CP31995 323 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 OPRM1P35372 400 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 C21orf58P58505 322 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 ZP1P60852 638 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 TLE1Q04724 770 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 IKZF1Q13422 519 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 SHHQ15465 462 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 FAM189A2Q15884 450 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 OCSTAMPQ9BR26 566 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 DHCR7Q9UBM7 475 aaKnown RBP12.25□□□□□ -0.45
USP42-206ENST00000479544 hCG_1809904A0A1W2PP81 198 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 A0A1W2PR64 198 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 A0A1W2PRV1 198 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 CPED1A4D0V7 1026 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 BHLHE40O14503 412 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 OR2C1O95371 312 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 FAM69BQ5VUD6 431 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 OGFOD3Q6PK18 319 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 Q6ZSR6 202 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 NAXDQ8IW45 347 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 OR1E3Q8WZA6 343 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 RGP1Q92546 391 aaPredicted RBP12.25□□□□□ -0.45
USP42-206ENST00000479544 CCDC74AQ96AQ1 378 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 SGCZQ96LD1 299 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 SLC19A3Q9BZV2 496 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 TUBG2Q9NRH3 451 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 PCDHGA1Q9Y5H4 931 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 CHD5Q8TDI0 1954 aa12.25□□□□□ -0.45
USP42-206ENST00000479544 ZNF318Q5VUA4 2279 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 IFNA5P01569 189 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 WDR38Q5JTN6 314 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 RGS7BPQ6MZT1 257 aaPredicted RBP12.24□□□□□ -0.45
USP42-206ENST00000479544 TMPRSS11FQ6ZWK6 438 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 SECTM1Q8WVN6 248 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 PIGTQ969N2 578 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 TOX2Q96NM4 488 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 TMED7Q9Y3B3 224 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 ARID2Q68CP9 1835 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 VSTM2BA6NLU5 285 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 C4orf47A7E2U8 309 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 HSPB6O14558 160 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 AQP8O94778 261 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 MRPS34P82930 218 aaKnown RBP12.24□□□□□ -0.45
USP42-206ENST00000479544 FAM209BQ5JX69 171 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 LHX8Q68G74 356 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 CD200R1LQ6Q8B3 271 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 TMEM182Q6ZP80 229 aaPredicted RBP12.24□□□□□ -0.45
USP42-206ENST00000479544 LYG2Q86SG7 212 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 ZPLD1Q8TCW7 415 aa12.24□□□□□ -0.45
USP42-206ENST00000479544 ZBP1Q9H171 429 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms