RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 BOD1L1Q8NFC6 3051 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ESPL1Q14674 2120 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 IGKV1D-42A0A075B6H8 117 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 A0A087WUU8 490 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 A0A1W2PPL8 197 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF724A8MTY0 619 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 FFAR1O14842 300 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SMAD9O15198 467 aaKnown RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RNF13O43567 381 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SS18L1O75177 396 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 TIPRLO75663 272 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PRSS23O95084 383 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 AKR7A3O95154 331 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 LYPD3O95274 346 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SNAP29O95721 258 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 BGLAPP02818 100 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 THY1P04216 161 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CD1AP06126 327 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ADORA3P0DMS8 318 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RPS2P15880 293 aaKnown RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF43P17038 809 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 FUT1P19526 365 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 AGAP20933 346 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PTNP21246 168 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 GSTM3P21266 225 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ZP3P21754 424 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 AHCYP23526 432 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CRHBPP24387 322 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 GRPRP30550 384 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CEACAM8P31997 349 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CTXN1P60606 82 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PRPS1P60891 318 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RAB14P61106 215 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CSNK2BP67870 215 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PUDPQ08623 228 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 EXOC3L2Q2M3D2 409 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RFX4Q33E94 735 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SLC25A35Q3KQZ1 300 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 FAM76BQ5HYJ3 339 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CLLU1Q5K131 121 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SYT6Q5T7P8 510 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ABLIM2Q6H8Q1 611 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RTL6Q6ICC9 239 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 WDR88Q6ZMY6 472 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 H1FNTQ75WM6 255 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 OAFQ86UD1 273 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 STX12Q86Y82 276 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 P3H2Q8IVL5 708 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 UEVLDQ8IX04 471 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 NRMQ8IXM6 262 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CMTM4Q8IZR5 234 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF808Q8N4W9 903 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM99Q8N816 258 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 C9orf106Q8NAJ2 232 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 OR4K5Q8NGD3 323 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 OR6K3Q8NGY3 331 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SLC7A13Q8TCU3 470 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 GNPDA2Q8TDQ7 276 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 CA5BP1Q8WTZ4 195 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SLC7A6Q92536 515 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 OXGR1Q96P68 337 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RBM14Q96PK6 669 aaKnown RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 WACQ9BTA9 647 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PTDSS2Q9BVG9 487 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 FUNDC2Q9BWH2 189 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 SLIRPQ9GZT3 109 aaKnown RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 RNF122Q9H9V4 155 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 MAN2C1Q9NTJ4 1040 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 DDX28Q9NUL7 540 aaKnown RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PARPBPQ9NWS1 579 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 KLHL13Q9P2N7 655 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF629Q9UEG4 869 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-209ENST00000479532 PROCRQ9UNN8 238 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 MGAT4BQ9UQ53 548 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 LYVE1Q9Y5Y7 322 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 U3KQV3 271 aa5.47□□□□□ -1.53
SF3B1-209ENST00000479532 A0A0G2JMP0 313 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 TRBV4-1A0A0J9YWV2 114 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 A0A1W2PNV4 684 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ARRDC5A6NEK1 342 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF726A6NNF4 738 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF99A8MXY4 864 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 EEF1E1-BLOC1S5C9J1V9 151 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 KRBOX1C9JBD0 128 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 MCIDASD6RGH6 385 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 FTCDNL1E5RQL4 147 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 C11orf98E9PRG8 122 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 F8W036 122 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 BLOC1S5-TXNDC5H3BN57 136 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 PYCARD-AS1I3L0S3 204 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 F2RL2O00254 374 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 PLPP3O14495 311 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 EEF1E1O43324 174 aaKnown RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 PIP5K1CO60331 668 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 FZD7O75084 574 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 MRPL33O75394 65 aaKnown RBP5.46□□□□□ -1.54
SF3B1-209ENST00000479532 KRT33AO76009 404 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 AQP8O94778 261 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 SLPIP03973 132 aa5.46□□□□□ -1.54
SF3B1-209ENST00000479532 IFNA4P05014 189 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms