RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PRR31Q5SQ13 230 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 Q6ZR03 302 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
VCL-205ENST00000478896 RRM2BQ7LG56 351 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 VTCN1Q7Z7D3 282 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 LRRC28Q86X40 367 aaPredicted RBP11.15□□□□□ -0.62
VCL-205ENST00000478896 BCL6BQ8N143 479 aaPredicted RBP11.15□□□□□ -0.62
VCL-205ENST00000478896 ATG16L2Q8NAA4 619 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 SLC25A28Q96A46 364 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 SIGLEC11Q96RL6 698 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
VCL-205ENST00000478896 POLR1DQ9Y2S0 133 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.62
VCL-205ENST00000478896 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 CEACAM18A8MTB9 384 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 KCNAB3O43448 404 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 ZNF682O95780 498 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 CD14P08571 375 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 RPS2P15880 293 aaKnown RBP11.14□□□□□ -0.63
VCL-205ENST00000478896 FUT4P22083 530 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 MMP16P51512 607 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 MESTQ5EB52 335 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 KLF17Q5JT82 389 aaPredicted RBP11.14□□□□□ -0.63
VCL-205ENST00000478896 FKBP9P1Q75LS8 142 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 RNF113BQ8IZP6 322 aaKnown RBP11.14□□□□□ -0.63
VCL-205ENST00000478896 PARP8Q8N3A8 854 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 OR10AD1Q8NGE0 317 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 OR52E2Q8NGJ4 325 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 ACOT11Q8WXI4 607 aaPredicted RBP11.14□□□□□ -0.63
VCL-205ENST00000478896 SLC7A6Q92536 515 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 Q96M85 177 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 ZNF696Q9H7X3 374 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 UNKLQ9H9P5 680 aaKnown RBP11.14□□□□□ -0.63
VCL-205ENST00000478896 ASH2LQ9UBL3 628 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 LRCH1Q9Y2L9 728 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 STARD10Q9Y365 291 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 SNX13Q9Y5W8 968 aa11.14□□□□□ -0.63
VCL-205ENST00000478896 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 PRSS37A4D1T9 235 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 F5H0A9 414 aaPredicted RBP11.13□□□□□ -0.63
VCL-205ENST00000478896 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 CDC42EP2O14613 210 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 CTLA4P16410 223 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 MTNR1AP48039 350 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 ERFP50548 548 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 GNB2P62879 340 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 IL13RA1P78552 427 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 KRR1Q13601 381 aaKnown RBP11.13□□□□□ -0.63
VCL-205ENST00000478896 FHL1Q13642 323 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 ZBED5Q49AG3 693 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 IFI44LQ53G44 452 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 OTPQ5XKR4 325 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 SLC27A4Q6P1M0 643 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 MBOAT2Q6ZWT7 520 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 HDXQ7Z353 690 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
VCL-205ENST00000478896 PTP4A1Q93096 173 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 RASD2Q96D21 266 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 HAVCR1Q96D42 359 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 ZNF48Q96MX3 618 aaPredicted RBP11.13□□□□□ -0.63
VCL-205ENST00000478896 SYT4Q9H2B2 425 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 GCM1Q9NP62 436 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 IL20RAQ9UHF4 553 aa11.13□□□□□ -0.63
VCL-205ENST00000478896 A0A087WUU8 490 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 J3QW42 95 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 GSTA4O15217 222 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 AHCYL1O43865 530 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 SLC16A7O60669 478 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 KHDRBS3O75525 346 aaKnown RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 ZNF205O95201 554 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 GPANK1O95872 356 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 CYB5R3P00387 301 aaPredicted RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 RAC2P15153 192 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 CENPAP49450 140 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 SRP9P49458 86 aaKnown RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 RGS6P49758 472 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 HLXQ14774 488 aaPredicted RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 OR2T2Q6IF00 324 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 TBPL2Q6SJ96 375 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 LRRN1Q6UXK5 716 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 FAM122BQ7Z309 247 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 ARPINQ7Z6K5 226 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 JAZF1Q86VZ6 243 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 CYP4Z1Q86W10 505 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 OR5L1Q8NGL2 311 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 FAM46AQ96IP4 442 aaKnown RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 PLEKHA8Q96JA3 519 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 HSH2DQ96JZ2 352 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 C1orf147Q96MC9 270 aaPredicted RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 SAR1AQ9NR31 198 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 TMEM5Q9Y2B1 443 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 COA3Q9Y2R0 106 aaPredicted RBP11.12□□□□□ -0.63
VCL-205ENST00000478896 AP3M1Q9Y2T2 418 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms