RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RNFT2Q96EX2 444 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 POM121Q96HA1 1249 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 MS4A3Q96HJ5 214 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 Q9H521 79 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 HAO2Q9NYQ3 351 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 DNHD1Q96M86 4753 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 SIAH2O43255 324 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 SBK2P0C263 348 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 ATP6V1E1P36543 226 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 BSPH1Q075Z2 132 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 SPOCK1Q08629 439 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 PCK2Q16822 640 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 TMEM154Q6P9G4 183 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 VASH1Q7L8A9 365 aaPredicted RBP13.31□□□□□ -0.28
SEC13-215ENST00000477547 ZNF584Q8IVC4 421 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 SLC35F2Q8IXU6 374 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 OTOSQ8NHW6 89 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 SMAP2Q8WU79 429 aaPredicted RBP13.31□□□□□ -0.28
SEC13-215ENST00000477547 FBLIM1Q8WUP2 373 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 PIK3IP1Q96FE7 263 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 PLPPR2Q96GM1 343 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 MAP6Q96JE9 813 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 ZNF75AQ96N20 296 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 KCNS3Q9BQ31 491 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 YIPF3Q9GZM5 350 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 C1orf198Q9H425 327 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
SEC13-215ENST00000477547 KLHDC2Q9Y2U9 406 aa13.31□□□□□ -0.28
SEC13-215ENST00000477547 PLCE1Q9P212 2302 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 DEFB108AA8MXU0 73 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 PTHP01270 115 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 SERPINA5P05154 406 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 LYNP07948 512 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 PTAFRP25105 342 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 CD40P25942 277 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 APEX1P27695 318 aaKnown RBP13.3□□□□□ -0.28
SEC13-215ENST00000477547 APLNRP35414 380 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 NR1H2P55055 460 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 CDK5R2Q13319 367 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 TBC1D28Q2M2D7 210 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
SEC13-215ENST00000477547 ELFN2Q5R3F8 820 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 KRT80Q6KB66 452 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 CDC20BQ86Y33 519 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 ALDH16A1Q8IZ83 802 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 RFLNBQ8N5W9 214 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 ZNF454Q8N9F8 522 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 SLC30A7Q8NEW0 376 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 ST7LQ8TDW4 575 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 SLAMF6Q96DU3 332 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 ATF6BQ99941 703 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 ABHD6Q9BV23 337 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 TTTY10Q9BZA0 68 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 AMBNQ9NP70 447 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 ATPIF1Q9UII2 106 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 LAMP5Q9UJQ1 280 aa13.3□□□□□ -0.28
SEC13-215ENST00000477547 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
SEC13-215ENST00000477547 RAI1Q7Z5J4 1906 aaPredicted RBP13.3□□□□□ -0.28
SEC13-215ENST00000477547 ABCA4P78363 2273 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 OR6C6A6NF89 314 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 DPRXA6NFQ7 191 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 A6NNC1 897 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 ZNF878C9JN71 531 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 ABCD4O14678 606 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 SYNGR3O43761 229 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 FAM20BO75063 409 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 GOSR1O95249 250 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 STOMP27105 288 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 NAAAQ02083 359 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 NCMAPQ5T1S8 102 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 SPATC1Q76KD6 591 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 CPEB3Q8NE35 698 aaKnown RBP13.29□□□□□ -0.28
SEC13-215ENST00000477547 OR4F15Q8NGB8 312 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 OR10S1Q8NGN2 331 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 OR1F12Q8NHA8 337 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 AMELYQ99218 206 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 TBX5Q99593 518 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 COQ7Q99807 217 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 COPS4Q9BT78 406 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 CDH20Q9HBT6 801 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 PNRC2Q9NPJ4 139 aaKnown RBP13.29□□□□□ -0.28
SEC13-215ENST00000477547 COPS3Q9UNS2 423 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 TMEM14AQ9Y6G1 99 aa13.29□□□□□ -0.28
SEC13-215ENST00000477547 IGHV2OR16-5A0A0B4J2B6 119 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 ZNF670-ZNF695F2Z2N8 137 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 PHYHO14832 338 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 CRYAAP02489 173 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 CD3EP07766 207 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 COX5BP10606 129 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 CCL2P13500 99 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms