RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TEX47Q8TBZ9 253 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 Q96MF0 132 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 COQ7Q99807 217 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 RHNO1Q9BSD3 238 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 TSSK6Q9BXA6 273 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 TEX12Q9BXU0 123 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 PLA2G12AQ9BZM1 189 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 NMNAT2Q9BZQ4 307 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 NKIRAS2Q9NYR9 191 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 LOC100509620A0A075B734 347 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 RIIAD1A6NNX1 92 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 H0YJX3 145 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 M0R233 179 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 IGHV3-13P01766 116 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 MT-ND5P03915 603 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 HMGN1P05114 100 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC25A16P16260 332 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF3P17036 446 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 PEX2P28328 305 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 NUDT6P53370 316 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 PCK2Q16822 640 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 CLEC12AQ5QGZ9 265 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 MBNL2Q5VZF2 373 aaKnown RBP10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 CLEC2AQ6UVW9 174 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 VASH1Q7L8A9 365 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 CYSLTR2Q9NS75 346 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 ASH2LQ9UBL3 628 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 CYB5R1Q9UHQ9 305 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 ORC6Q9Y5N6 252 aa10.63□□□□□ -0.71
CLCNKA-205ENST00000477360 LOC390937A0A1W2PQ73 354 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 C5orf49A4QMS7 147 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 ZAR1LA6NP61 321 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 H3BN98 237 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 DCTN6O00399 190 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SOX14O95416 240 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SCG5P05408 212 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 ADH4P08319 380 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 INHBBP09529 407 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 KLF3P57682 345 aaPredicted RBP10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF718Q3SXZ3 478 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 ZMAT1Q5H9K5 638 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SLX4IPQ5VYV7 408 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 LPCAT4Q643R3 524 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF774Q6NX45 483 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 VHLLQ6RSH7 139 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 PAQR4Q8N4S7 273 aaPredicted RBP10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC37A3Q8NCC5 494 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SDR9C7Q8NEX9 313 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 OR4Q3Q8NH05 313 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 OR1F12Q8NHA8 337 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SYNPRQ8TBG9 265 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 C4orf45Q96LM5 186 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 MRPL37Q9BZE1 423 aaKnown RBP10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 SRA1Q9HD15 236 aaKnown RBP10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 EMC7Q9NPA0 242 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 RPRD1BQ9NQG5 326 aaKnown RBP10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 PLEK2Q9NYT0 353 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 MED13LQ71F56 2210 aa10.62□□□□□ -0.71
CLCNKA-205ENST00000477360 ARFGEF3Q5TH69 2177 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 DLGAP1O14490 977 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 GPRIN2O60269 458 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 DOK2O60496 412 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 MITFO75030 526 aaPredicted RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 TFP02787 698 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 IGFBP1P08833 259 aaPredicted RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF823P16415 610 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 PAICSP22234 425 aaKnown RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 GIFP27352 417 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 GGT2P36268 569 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 WNT5AP41221 380 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 HTR5AP47898 357 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 TEKQ02763 1124 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 TNK1Q13470 666 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 PTGES3Q15185 160 aaKnown RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 KRTAP27-1Q3LI81 207 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 ELFN2Q5R3F8 820 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC35F1Q5T1Q4 408 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 UGT2A3Q6UWM9 527 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 PROKR2Q8NFJ6 384 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 OR5L1Q8NGL2 311 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 AKR7LQ8NHP1 331 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 NRG4Q8WWG1 115 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 HTRA1Q92743 480 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 MARS2Q96GW9 593 aaKnown RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 HRASLS5Q96KN8 279 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 TSSK2Q96PF2 358 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 SORCS2Q96PQ0 1159 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 PITX2Q99697 317 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 CDADC1Q9BWV3 514 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 PRRG3Q9BZD7 231 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 VCXQ9H320 206 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 VCX3BQ9H321 246 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 DYNLRB1Q9NP97 96 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 GDF2Q9UK05 429 aaPredicted RBP10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 POLR1DQ9Y2S0 133 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 LHFPL6Q9Y693 200 aa10.61□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF469Q96JG9 3925 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms