RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 FAM20BO75063 409 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 APOL3O95236 402 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 TFP02787 698 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 MRPL3P09001 348 aaKnown RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 GAAP10253 952 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 DBTP11182 482 aaKnown RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 B4GALT1P15291 398 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 NAA10P41227 235 aaPredicted RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 SH3BGRP55822 239 aaPredicted RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 HSF2Q03933 536 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 STK11Q15831 433 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 CYB5R2Q6BCY4 276 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 KLHL24Q6TFL4 600 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 UGT2A3Q6UWM9 527 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 ERI1Q8IV48 349 aaKnown RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 ZNF786Q8N393 782 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 ZNF433Q8N7K0 673 aaPredicted RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 BPIFB6Q8NFQ5 453 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 OR1K1Q8NGR3 316 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 C11orf40Q8WZ69 217 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 NABP1Q96AH0 204 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 RNFT2Q96EX2 444 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 WDR76Q9H967 626 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 POLE4Q9NR33 117 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 MRPL22Q9NWU5 206 aaKnown RBP10.04□□□□□ -0.8
LSM2-212ENST00000477182 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.04□□□□□ -0.8
LSM2-212ENST00000477182 LRCH1Q9Y2L9 728 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 COMMD3-BMI1R4GMX3 469 aa10.04□□□□□ -0.8
LSM2-212ENST00000477182 A0A096LPE4 126 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 A0A0G2JK05 382 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 A0A1W2PPZ6 126 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 SLC1A7O00341 560 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 LMX1BO60663 402 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 RAD51DO75771 328 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 PLAUP00749 431 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 IGHV4-39P01824 125 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 PSKH1P11801 424 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 NPR2P20594 1047 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 HNF1AP20823 631 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 MSR1P21757 451 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 RPS27P42677 84 aaKnown RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 GUCA1AP43080 201 aaPredicted RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 MTNR1AP48039 350 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 BLVRAP53004 296 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 TGFBR3Q03167 851 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 LOXL1Q08397 574 aaPredicted RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 TMED1Q13445 227 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 GGTLC2Q14390 218 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 P2RY6Q15077 328 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 KCNMB1Q16558 191 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 SFRP5Q5T4F7 317 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 ADAM5Q6NVV9 412 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 ANKRD16Q6P6B7 361 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 STAC2Q6ZMT1 411 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 SHFQ7M4L6 423 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 BHLHA15Q7RTS1 189 aaPredicted RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 TIGD4Q8IY51 512 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 LRRC18Q8N456 261 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 SLC22A24Q8N4F4 322 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 OR10H5Q8NGA6 315 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 OR4F15Q8NGB8 312 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 OR51G2Q8NGK0 314 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 OR6N2Q8NGY6 317 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 SMAP2Q8WU79 429 aaPredicted RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 BCL2L2Q92843 193 aaPredicted RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 FBXW5Q969U6 566 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 PLPPR2Q96GM1 343 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 INTS14Q96SY0 518 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 SH3GL3Q99963 347 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 NELFAQ9H3P2 528 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
LSM2-212ENST00000477182 RPL36Q9Y3U8 105 aaKnown RBP10.03□□□□□ -0.8
LSM2-212ENST00000477182 PRR14LQ5THK1 2151 aa10.02□□□□□ -0.8
LSM2-212ENST00000477182 ZNF593O00488 134 aaPredicted RBP10.02□□□□□ -0.81
LSM2-212ENST00000477182 SPARCP09486 303 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 SBK2P0C263 348 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 OR8G3PP0DMU2 310 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 ZNF823P16415 610 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 EGR1P18146 543 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 ATP6V1E1P36543 226 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 CDKN1AP38936 164 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 ENTPD1P49961 510 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 DSCR9P59020 149 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 CXCR4P61073 352 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 ENDOGQ14249 297 aaKnown RBP10.02□□□□□ -0.81
LSM2-212ENST00000477182 GABRA6Q16445 453 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 HIKESHIQ53FT3 197 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 FAM27BQ5VT28 67 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 C22orf34Q6ZV56 151 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 ZNF627Q7L945 461 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 SLC16A9Q7RTY1 509 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 SKA3Q8IX90 412 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 GGHQ92820 318 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 LGALS12Q96DT0 336 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 CNN2Q99439 309 aaKnown RBP10.02□□□□□ -0.81
LSM2-212ENST00000477182 ZNF416Q9BWM5 594 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 MARCH7Q9H992 704 aa10.02□□□□□ -0.81
LSM2-212ENST00000477182 SIAEQ9HAT2 523 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms