RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 BTN2A1Q7KYR7 527 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 ALDH16A1Q8IZ83 802 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 C1orf87Q8N0U7 546 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 C10orf111Q8N326 155 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 ASB10Q8WXI3 467 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 TBCCD1Q9NVR7 557 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 CAB39Q9Y376 341 aaPredicted RBP12.53□□□□□ -0.4
SMG5-204ENST00000476954 SMIM23A6NLE4 172 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 NPFFO15130 113 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 FAM20BO75063 409 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 HLA-DPB1P04440 258 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 ACADSP16219 412 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 GUCY1A3Q02108 690 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 NKAPLQ5M9Q1 402 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 CLEC12AQ5QGZ9 265 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.41
SMG5-204ENST00000476954 MUC7Q8TAX7 377 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 C17orf50Q8WW18 174 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 RORBQ92753 470 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 TPT1P8Q9HAU6 139 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 TMEM27Q9HBJ8 222 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 BCL2L10Q9HD36 194 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 TIMM10BQ9Y5J6 103 aa12.52□□□□□ -0.41
SMG5-204ENST00000476954 ELOVL7A1L3X0 281 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 MCIDASD6RGH6 385 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 E9PQ18 207 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 KPNA4O00629 521 aaPredicted RBP12.51□□□□□ -0.41
SMG5-204ENST00000476954 CHST1O43916 411 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PAHP00439 452 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PAX6P26367 422 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 SAA4P35542 130 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
SMG5-204ENST00000476954 NCALDP61601 193 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 ENDOGQ14249 297 aaKnown RBP12.51□□□□□ -0.41
SMG5-204ENST00000476954 CDONQ4KMG0 1287 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PRAMEF6Q5VXH4 476 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 NXNQ6DKJ4 435 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 SLC25A47Q6Q0C1 308 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 LINC00114Q6XXX2 140 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
SMG5-204ENST00000476954 IGFN1Q86VF2 1251 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 CLDN22Q8N7P3 220 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PAPD5Q8NDF8 572 aaKnown RBP12.51□□□□□ -0.41
SMG5-204ENST00000476954 BHLHE23Q8NDY6 225 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 OR8G5Q8NG78 346 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 OR13G1Q8NGZ3 307 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 HDAC2Q92769 488 aaKnown RBP12.51□□□□□ -0.41
SMG5-204ENST00000476954 PTP4A1Q93096 173 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 UFSP2Q9NUQ7 469 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PTTG3PQ9NZH4 202 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
SMG5-204ENST00000476954 MEIOCA2RUB1 952 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 RFXANKO14593 260 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 SHBGP04278 402 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 SCG5P05408 212 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 CST2P09228 141 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 NHLRC4P0CG21 123 aaPredicted RBP12.5□□□□□ -0.41
SMG5-204ENST00000476954 IRF2P14316 349 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 SERPINB5P36952 375 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 UGT2B15P54855 530 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 PRSS12P56730 875 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 MAB21L1Q13394 359 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 MPPED2Q15777 294 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 KLHL22Q53GT1 634 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 CNPY4Q8N129 248 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 BBS10Q8TAM1 723 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
SMG5-204ENST00000476954 SSX3Q99909 188 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
SMG5-204ENST00000476954 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 NANSQ9NR45 359 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 C20orf141Q9NUB4 165 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 ONECUT1Q9UBC0 465 aa12.5□□□□□ -0.41
SMG5-204ENST00000476954 HUWE1Q7Z6Z7 4374 aaKnown RBP12.49□□□□□ -0.41
SMG5-204ENST00000476954 HERC2O95714 4834 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 A0A1B0GVI7 797 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 BLOC1S5-TXNDC5H3BN57 136 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 DVL1O14640 695 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 HDAC3O15379 428 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 ITM2AO43736 263 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 LYPD3O95274 346 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 THY1P04216 161 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 ALDOCP09972 364 aaKnown RBP12.49□□□□□ -0.41
SMG5-204ENST00000476954 FAM153BP0C7A2 387 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 ASAH2BP0C7U1 165 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 RAC2P15153 192 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 CASQ1P31415 396 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 RPL18Q07020 188 aaKnown RBP12.49□□□□□ -0.41
SMG5-204ENST00000476954 POU4F2Q12837 409 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 DHRS4L2Q6PKH6 230 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 NANOGNBQ7Z5D8 188 aa12.49□□□□□ -0.41
SMG5-204ENST00000476954 NPRL2Q8WTW4 380 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms