RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 TRAM2Q15035 370 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 ARMCX4Q5H9R4 360 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 TBPL2Q6SJ96 375 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 MBOAT2Q6ZWT7 520 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 TREML1Q86YW5 311 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 RNF113BQ8IZP6 322 aaKnown RBP11.01□□□□□ -0.65
MRPL55-228ENST00000476267 SLC7A6Q92536 515 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 CMBLQ96DG6 245 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 Q96M85 177 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 OR2V2Q96R30 315 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 VIPAS39Q9H9C1 493 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 ZMAT3Q9HA38 289 aaKnown RBP11.01□□□□□ -0.65
MRPL55-228ENST00000476267 GCM1Q9NP62 436 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 MRGBPQ9NV56 204 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 CMTM6Q9NX76 183 aa11.01□□□□□ -0.65
MRPL55-228ENST00000476267 A0A1B0GWJ7 208 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 PRSS37A4D1T9 235 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 CEACAM18A8MTB9 384 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 TMEM178BH3BS89 294 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 CLDN34H7C241 214 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 J3QW42 95 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 IMPA2O14732 288 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 SGCEO43556 437 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 IFNW1P05000 195 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 RNASE1P07998 156 aaKnown RBP11□□□□□ -0.65
MRPL55-228ENST00000476267 GUCA1AP43080 201 aaPredicted RBP11□□□□□ -0.65
MRPL55-228ENST00000476267 GPR4P46093 362 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 FXYD6P3P58550 94 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 AQP6Q13520 282 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 MAPRE2Q15555 327 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 ZBED5Q49AG3 693 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 CCDC92Q53HC0 331 aaPredicted RBP11□□□□□ -0.65
MRPL55-228ENST00000476267 OTPQ5XKR4 325 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 SHISA2Q6UWI4 295 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 CBLL1Q75N03 491 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 GPX7Q96SL4 187 aaPredicted RBP11□□□□□ -0.65
MRPL55-228ENST00000476267 FNDC11Q9BVV2 318 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 ATPIF1Q9UII2 106 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
MRPL55-228ENST00000476267 LOC100653049A0A140TA62 436 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 PTP4A3O75365 173 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 KRT34O76011 436 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 FSTL3O95633 263 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 PLATP00750 562 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 WNT2P09544 360 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 PPIAL4GP0DN37 164 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 RAC2P15153 192 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 TNFSF4P23510 183 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 CD80P33681 288 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 MDH2P40926 338 aaKnown RBP10.99□□□□□ -0.65
MRPL55-228ENST00000476267 LSM6P62312 80 aaKnown RBP10.99□□□□□ -0.65
MRPL55-228ENST00000476267 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 GUCY1A3Q02108 690 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 KCNMB1Q16558 191 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 HIST2H3PS2Q5TEC6 136 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 C8orf82Q6P1X6 216 aaPredicted RBP10.99□□□□□ -0.65
MRPL55-228ENST00000476267 FBXW12Q6X9E4 464 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 HIST2H3AQ71DI3 136 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 SLC15A3Q8IY34 581 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 PCYOX1LQ8NBM8 494 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 LZICQ8WZA0 190 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 PTP4A1Q93096 173 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 ZNF570Q96NI8 536 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 GPA33Q99795 319 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 NRIP3Q9NQ35 241 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 GID8Q9NWU2 228 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 VSX1Q9NZR4 365 aaPredicted RBP10.99□□□□□ -0.65
MRPL55-228ENST00000476267 ASH2LQ9UBL3 628 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 GRHPRQ9UBQ7 328 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 SIGLEC7Q9Y286 467 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 LRCH1Q9Y2L9 728 aa10.99□□□□□ -0.65
MRPL55-228ENST00000476267 NME4O00746 187 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 MLNRO43193 412 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 DBHP09172 617 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 IGHV4-38-2P0DP08 117 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 CPT2P23786 658 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 SDHAP31040 664 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 IFNA8P32881 189 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 KRR1Q13601 381 aaKnown RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 HLXQ14774 488 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 ZNF181Q2M3W8 571 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 IFI44LQ53G44 452 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 RBMS3Q6XE24 437 aaKnown RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 ZNF730Q6ZMV8 503 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 HDXQ7Z353 690 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 OR1F12Q8NHA8 337 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 ZNF420Q8TAQ5 688 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 SLC7A13Q8TCU3 470 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 UPRTQ96BW1 309 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 RCN3Q96D15 328 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 RASD2Q96D21 266 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 MEGF10Q96KG7 1140 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 COG8Q96MW5 612 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 MRI1Q9BV20 369 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 ANKRD19PQ9H560 264 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 NMNAT1Q9HAN9 279 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms