RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 KLF17Q5JT82 389 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 HIST2H3PS2Q5TEC6 136 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 DCAF12L2Q5VW00 463 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SHQ1Q6PI26 577 aaKnown RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 HIST2H3AQ71DI3 136 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 FKBP9P1Q75LS8 142 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 LRRC28Q86X40 367 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF283Q8N7M2 679 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 OR2Z1Q8NG97 314 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 OR4M2Q8NGB6 313 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 OR1F12Q8NHA8 337 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 PTP4A1Q93096 173 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 TIMD4Q96H15 378 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SAMD8Q96LT4 415 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 GPX7Q96SL4 187 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SLC6A7Q99884 636 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 GAL3ST1Q99999 423 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 C1QTNF5Q9BXJ0 243 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 NUAK2Q9H093 628 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 EFCAB1Q9HAE3 211 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ELOVL3Q9HB03 270 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 CYSLTR2Q9NS75 346 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 MRGBPQ9NV56 204 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 VSX1Q9NZR4 365 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ABCD2Q9UBJ2 740 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ASH2LQ9UBL3 628 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 EGFL7Q9UHF1 273 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 NDRG4Q9ULP0 352 aaKnown RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 POLR3KQ9Y2Y1 108 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 IER3IP1Q9Y5U9 82 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 NPTNQ9Y639 398 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SOX21Q9Y651 276 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PPIAL4EA0A075B759 164 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PPIAL4CA0A0B4J2A2 164 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 IGHV3-64DA0A0J9YX35 117 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ISPDA4D126 451 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PPIAL4DF5H284 164 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 H3BSA7 217 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 SOCS2O14508 198 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 SGCEO43556 437 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 TIMM8AO60220 97 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 DOK2O60496 412 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 KHDRBS3O75525 346 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 NDUFB2O95178 105 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF205O95201 554 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 TXNDC12O95881 172 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 H1F0P07305 194 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PPIAL4FP0DN26 164 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 SELEP16581 610 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 SDHAP31040 664 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 IFNA8P32881 189 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 MDH1P40925 334 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ARHGDIAP52565 204 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 LSM6P62312 80 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 HOXA4Q00056 320 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PAX2Q02962 417 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF154Q13106 437 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 KRR1Q13601 381 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 KCNMB1Q16558 191 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 KRTAP27-1Q3LI81 207 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 GLYATQ6IB77 296 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 C1orf94Q6P1W5 598 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 CORO6Q6QEF8 472 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 UNQ6126/PRO20091Q6UXV3 157 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 C12orf54Q6X4T0 127 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 HACD2Q6Y1H2 254 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 COLCA1Q6ZS62 124 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ARPINQ7Z6K5 226 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ZER1Q7Z7L7 766 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 NAA40Q86UY6 237 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 GLB1L2Q8IW92 636 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 BCL6BQ8N143 479 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 OR6V1Q8N148 313 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 RNF148Q8N7C7 305 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 OR52J3Q8NH60 311 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 NANPQ8TBE9 248 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF418Q8TF45 676 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ITLN1Q8WWA0 313 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 TAF15Q92804 592 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 RAB39BQ96DA2 213 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 DHRS1Q96LJ7 313 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 C1orf147Q96MC9 270 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF48Q96MX3 618 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF570Q96NI8 536 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 DIRC2Q96SL1 478 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 WACQ9BTA9 647 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 EGLN1Q9GZT9 426 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 ANKRD19PQ9H560 264 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PATZ1Q9HBE1 687 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 GCM1Q9NP62 436 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 DCAF13Q9NV06 445 aaKnown RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 PLEK2Q9NYT0 353 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 CGGBP1Q9UFW8 167 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-207ENST00000475549 AP3M1Q9Y2T2 418 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 LHFPL6Q9Y693 200 aa5.9□□□□□ -1.46
HDAC3-207ENST00000475549 MGAM2Q2M2H8 2515 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 IGLV1-36A0A0B4J1U3 117 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 A0A1B0GWJ7 208 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms