RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RNF141Q8WVD5 230 aa10□□□□□ -0.81
VAPB-204ENST00000475243 NMES1Q9C002 83 aa10□□□□□ -0.81
VAPB-204ENST00000475243 OR52A5Q9H2C5 316 aa10□□□□□ -0.81
VAPB-204ENST00000475243 ACER3Q9NUN7 267 aa10□□□□□ -0.81
VAPB-204ENST00000475243 MMP17Q9ULZ9 603 aa10□□□□□ -0.81
VAPB-204ENST00000475243 UGT2A1Q9Y4X1 527 aa10□□□□□ -0.81
VAPB-204ENST00000475243 TRDV1A0A1B0GX56 115 aa10□□□□□ -0.81
VAPB-204ENST00000475243 GPX2P18283 190 aa10□□□□□ -0.81
VAPB-204ENST00000475243 EIF2DP41214 584 aaKnown RBP10□□□□□ -0.81
VAPB-204ENST00000475243 RAB13P51153 203 aa10□□□□□ -0.81
VAPB-204ENST00000475243 MLF1P58340 268 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SPANXN5Q5MJ07 72 aa10□□□□□ -0.81
VAPB-204ENST00000475243 OR10K2Q6IF99 312 aa10□□□□□ -0.81
VAPB-204ENST00000475243 CREB3L2Q70SY1 520 aa10□□□□□ -0.81
VAPB-204ENST00000475243 NLRP8Q86W28 1048 aa10□□□□□ -0.81
VAPB-204ENST00000475243 OR13F1Q8NGS4 319 aa10□□□□□ -0.81
VAPB-204ENST00000475243 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
VAPB-204ENST00000475243 MYEOVQ96EZ4 313 aa10□□□□□ -0.81
VAPB-204ENST00000475243 RTL8AQ9BWD3 113 aa10□□□□□ -0.81
VAPB-204ENST00000475243 TARM1B6A8C7 271 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SSSCA1O60232 199 aa10□□□□□ -0.81
VAPB-204ENST00000475243 ATP1B1P05026 303 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SBK2P0C263 348 aa10□□□□□ -0.81
VAPB-204ENST00000475243 RBP2P50120 134 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SRPXP78539 464 aa10□□□□□ -0.81
VAPB-204ENST00000475243 PRSS35Q8N3Z0 413 aa10□□□□□ -0.81
VAPB-204ENST00000475243 OR6M1Q8NGM8 313 aa10□□□□□ -0.81
VAPB-204ENST00000475243 RDH5Q92781 318 aa10□□□□□ -0.81
VAPB-204ENST00000475243 LRFN5Q96NI6 719 aa10□□□□□ -0.81
VAPB-204ENST00000475243 EXOSC3Q9NQT5 275 aaKnown RBP10□□□□□ -0.81
VAPB-204ENST00000475243 ASB1Q9Y576 335 aa10□□□□□ -0.81
VAPB-204ENST00000475243 HRO43593 1189 aa10□□□□□ -0.81
VAPB-204ENST00000475243 CNR1P21554 472 aa10□□□□□ -0.81
VAPB-204ENST00000475243 GLRA1P23415 457 aa10□□□□□ -0.81
VAPB-204ENST00000475243 GFERP55789 205 aa10□□□□□ -0.81
VAPB-204ENST00000475243 UBE2G2P60604 165 aa10□□□□□ -0.81
VAPB-204ENST00000475243 ZNF266Q14584 549 aa10□□□□□ -0.81
VAPB-204ENST00000475243 PTRH1Q86Y79 214 aaKnown RBP10□□□□□ -0.81
VAPB-204ENST00000475243 TVP23CQ96ET8 276 aa10□□□□□ -0.81
VAPB-204ENST00000475243 MED29Q9NX70 200 aa10□□□□□ -0.81
VAPB-204ENST00000475243 ING1Q9UK53 422 aaPredicted RBP10□□□□□ -0.81
VAPB-204ENST00000475243 TOGARAM1Q9Y4F4 1720 aa10□□□□□ -0.81
VAPB-204ENST00000475243 ZNF385BQ569K4 471 aa10□□□□□ -0.81
VAPB-204ENST00000475243 PLAC9Q5JTB6 97 aa10□□□□□ -0.81
VAPB-204ENST00000475243 Q6ZRG5 221 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SH2D1BO14796 132 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SLC31A2O15432 143 aa10□□□□□ -0.81
VAPB-204ENST00000475243 WDR1O75083 606 aa10□□□□□ -0.81
VAPB-204ENST00000475243 IL2RAP01589 272 aa10□□□□□ -0.81
VAPB-204ENST00000475243 LAP3P28838 519 aa10□□□□□ -0.81
VAPB-204ENST00000475243 TMEM41BQ5BJD5 291 aa10□□□□□ -0.81
VAPB-204ENST00000475243 ANKRD34AQ69YU3 496 aa10□□□□□ -0.81
VAPB-204ENST00000475243 DBX2Q6ZNG2 339 aa10□□□□□ -0.81
VAPB-204ENST00000475243 TMEM182Q6ZP80 229 aaPredicted RBP10□□□□□ -0.81
VAPB-204ENST00000475243 OR5M9Q8NGP3 310 aa10□□□□□ -0.81
VAPB-204ENST00000475243 GPR119Q8TDV5 335 aa10□□□□□ -0.81
VAPB-204ENST00000475243 SLCO4A1Q96BD0 722 aa10□□□□□ -0.81
VAPB-204ENST00000475243 TIMD4Q96H15 378 aa10□□□□□ -0.81
VAPB-204ENST00000475243 EDEM2Q9BV94 578 aa10□□□□□ -0.81
VAPB-204ENST00000475243 PTDSS2Q9BVG9 487 aa10□□□□□ -0.81
VAPB-204ENST00000475243 GPR84Q9NQS5 396 aa10□□□□□ -0.81
VAPB-204ENST00000475243 DUSP22Q9NRW4 184 aa10□□□□□ -0.81
VAPB-204ENST00000475243 MEIKINA0A087WXM9 373 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 TRGV8A0A0C4DH27 118 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 SERTM2A0A1B0GWG4 89 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 BTBD17A6NE02 478 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 KIR2DL3P43628 341 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 EMDP50402 254 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ACKR1Q16570 336 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 KCNRGQ8N5I3 272 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 OR52I2Q8NH67 350 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 GON7Q9BXV9 100 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 NRAPQ86VF7 1730 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 A0A0B4J203 849 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 LOC107986453A0A1B0GWG9 222 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 EIF4E2O60573 245 aaKnown RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 CD22P20273 847 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 FAAP20Q6NZ36 180 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 NANOGP1Q8N7R0 232 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 NECAP1Q8NC96 275 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 C16orf52Q8NHV5 167 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 YIPF5Q969M3 257 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ISYNA1Q9NPH2 558 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 DOCK2Q92608 1830 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ARHGEF17Q96PE2 2063 aaPredicted RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 S100A11P31949 105 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 UBE2IP63279 158 aaKnown RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 TFAP2EQ6VUC0 442 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ZNF705AQ6ZN79 300 aaPredicted RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 DOK3Q7L591 496 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ROBO4Q8WZ75 1007 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 CCDC74BQ96LY2 380 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 FAM173AQ9BQD7 235 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 HES7Q9BYE0 225 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 A3GALT2U3KPV4 340 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 N4BP2Q86UW6 1770 aaPredicted RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 TNFRSF10CO14798 259 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 NME2P1O60361 137 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ZGLP1P0C6A0 271 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms