RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 NSMAFQ92636 917 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 DHRS1Q96LJ7 313 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 C1QTNF5Q9BXJ0 243 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 OR2J1Q9GZK6 312 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 ANKRD19PQ9H560 264 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 YY1AP1Q9H869 796 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 INIPQ9NRY2 104 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 FOXH1O75593 365 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 OR7A10O76100 309 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 SBK2P0C263 348 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 RRM2P31350 389 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 LIPAP38571 399 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 DAP3P51398 398 aaKnown RBP13.21□□□□□ -0.29
SRRT-209ENST00000474896 PSG4Q00888 419 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.29
SRRT-209ENST00000474896 DGCR6Q14129 220 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 FGD3Q5JSP0 725 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 OR2T5Q6IEZ7 315 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 HDDC2Q7Z4H3 204 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 OR2T29Q8NH02 315 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 PFN4Q8NHR9 129 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 TMEM239Q8WW34 195 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 NABP1Q96AH0 204 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 DUX5Q96PT3 197 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 DCLRE1CQ96SD1 692 aaKnown RBP13.21□□□□□ -0.29
SRRT-209ENST00000474896 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 MMP26Q9NRE1 261 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 CYSLTR2Q9NS75 346 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 ARMC1Q9NVT9 282 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 KLHL21Q9UJP4 597 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 UGT2A1Q9Y4X1 527 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 AP4S1Q9Y587 144 aa13.21□□□□□ -0.29
SRRT-209ENST00000474896 IGKV1D-43A0A0B4J1Z2 117 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 TRBV4-1A0A0J9YWV2 114 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 TIPRLO75663 272 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 GADD45GO95257 159 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 NGFP01138 241 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 RBMXP38159 391 aaKnown RBP13.2□□□□□ -0.3
SRRT-209ENST00000474896 SMIM11AP58511 58 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 PPP1CBP62140 327 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 ERVK-25P63136 954 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 FMODQ06828 376 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 ARMC4Q5T2S8 1044 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 OR52J3Q8NH60 311 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 MOSPD2Q8NHP6 518 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 ABHD4Q8TB40 342 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 SLC7A13Q8TCU3 470 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 PYDC1Q8WXC3 89 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 ACOT11Q8WXI4 607 aaPredicted RBP13.2□□□□□ -0.3
SRRT-209ENST00000474896 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
SRRT-209ENST00000474896 SGTBQ96EQ0 304 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 MSL2Q9HCI7 577 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 DCAF16Q9NXF7 216 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 VNN3Q9NY84 501 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 ZDHHC8Q9ULC8 765 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 LYVE1Q9Y5Y7 322 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 NPTNQ9Y639 398 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 MEGF8Q7Z7M0 2845 aa13.2□□□□□ -0.3
SRRT-209ENST00000474896 PPIAL4EA0A075B759 164 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 A0A087WUU8 490 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 PPIAL4CA0A0B4J2A2 164 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 PPIAL4DF5H284 164 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 CST1P01037 141 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 ADH4P08319 380 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 PPIAL4FP0DN26 164 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 PRTN3P24158 256 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 TNFAIP6P98066 277 aaPredicted RBP13.19□□□□□ -0.3
SRRT-209ENST00000474896 FAM27BQ5VT28 67 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 SLC25A47Q6Q0C1 308 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 ZNF730Q6ZMV8 503 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 C10orf67Q8IYJ2 551 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 ALDH16A1Q8IZ83 802 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 BCL6BQ8N143 479 aaPredicted RBP13.19□□□□□ -0.3
SRRT-209ENST00000474896 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
SRRT-209ENST00000474896 DIRC2Q96SL1 478 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 GPA33Q99795 319 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 FUZQ9BT04 418 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 OR2H1Q9GZK4 316 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 WNT5BQ9H1J7 359 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 REEP1Q9H902 201 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 C20orf141Q9NUB4 165 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 STX18Q9P2W9 335 aaKnown RBP13.19□□□□□ -0.3
SRRT-209ENST00000474896 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 PURGQ9UJV8 347 aaKnown RBP13.19□□□□□ -0.3
SRRT-209ENST00000474896 MED31Q9Y3C7 131 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 AUP1Q9Y679 476 aa13.19□□□□□ -0.3
SRRT-209ENST00000474896 TRAPPC2LH3BP13 241 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 TNFRSF11BO00300 401 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 KRT36O76013 467 aa13.18□□□□□ -0.3
SRRT-209ENST00000474896 IGHV2-70P01814 119 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms