RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 OPN1LWP04000 364 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 TCRBP04435 133 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 P04436 131 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 ZNF806P0C7X5 589 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 JMJD7P0C870 316 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 GABRA1P14867 456 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 CCL1P22362 96 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 TCEA1P23193 301 aaKnown RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 HIST1H3AP68431 136 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 PLA2G7Q13093 441 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 RAB11BQ15907 218 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 ODF4Q2M2E3 257 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 ACER2Q5QJU3 275 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 TMEM69Q5SWH9 247 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 BCL2L15Q5TBC7 163 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 HIST2H3PS2Q5TEC6 136 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 RAET1LQ5VY80 246 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 B3GNTL1Q67FW5 361 aaPredicted RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 JMJD6Q6NYC1 403 aaPredicted RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 ZNF529Q6P280 563 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 LRFN4Q6PJG9 635 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 CORO6Q6QEF8 472 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 KLHL24Q6TFL4 600 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 CFAP77Q6ZQR2 320 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 HIST2H3AQ71DI3 136 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 BTN2A1Q7KYR7 527 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 KRT74Q7RTS7 529 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 BIVMQ86UB2 503 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 IZUMO1Q8IYV9 350 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 TMEM123Q8N131 208 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 ESX1Q8N693 406 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 NKAIN3Q8N8D7 197 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 OR51D1Q8NGF3 324 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 OR6M1Q8NGM8 313 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 ADAMTS17Q8TE56 1095 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 PTX4Q96A99 478 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 INTS12Q96CB8 462 aaKnown RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 ADGRG7Q96K78 797 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 OR2M2Q96R28 347 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 CDC6Q99741 560 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 SF3B5Q9BWJ5 86 aaKnown RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 GPR87Q9BY21 358 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 B3GNT4Q9C0J1 378 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 GHITMQ9H3K2 345 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 P4HTMQ9NXG6 502 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 GLTPQ9NZD2 209 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 FOXD3Q9UJU5 478 aaPredicted RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 A0A0G2JMM0 328 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 A0A1B0GTI1 187 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 TMEM272A0A1B0GTI8 110 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 LOC101059948A0A1B0GTJ6 334 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 A0A1W2PPB8 328 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 A0A1W2PRS3 328 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 KIR3DP1A8MWS1 328 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 SMAD9O15198 467 aaKnown RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 CTAG2O75638 210 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 DHFRP00374 187 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 QDPRP09417 244 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 TMIGD3P0DMS9 266 aaPredicted RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 HSD11B1P28845 292 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 CSNK1A1P48729 337 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 DNASE1L1P49184 302 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 POU3F4P49335 361 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 MECP2P51608 486 aaKnown RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 CAPZA1P52907 286 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 CLDN17P56750 224 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 AP3S2P59780 193 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 RAC3P60763 192 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 GABREP78334 506 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 IFITM2Q01629 132 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 SSBP1Q04837 148 aaKnown RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 SNTB2Q13425 540 aaKnown RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 C2orf76Q3KRA6 126 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 ZFP69Q49AA0 526 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 ABLIM2Q6H8Q1 611 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 Q6ZSR3 168 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 GPAT4Q86UL3 456 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 GGNQ86UU5 652 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 ZIC4Q8N9L1 334 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 OR13C3Q8NGS6 347 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 FCAMRQ8WWV6 532 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 AKAP1Q92667 903 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP39-214ENST00000474572 NABP1Q96AH0 204 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 FAM3DQ96BQ1 224 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 FOXRED1Q96CU9 486 aaPredicted RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 UTP23Q9BRU9 249 aaKnown RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 CACNG6Q9BXT2 260 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 SRXN1Q9BYN0 137 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 PBOV1Q9GZY1 135 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
USP39-214ENST00000474572 HRASLSQ9HDD0 168 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 EMC7Q9NPA0 242 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 CENPMQ9NSP4 180 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 EMC3Q9P0I2 261 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 FOXJ2Q9P0K8 574 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 CKLFQ9UBR5 152 aa8.69□□□□□ -1.02
USP39-214ENST00000474572 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms