RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF557Q8N988 423 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR4C6Q8NH72 309 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR2AE1Q8NHA4 323 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SKA2Q8WVK7 121 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SNAPC3Q92966 411 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR2M2Q96R28 347 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 MS4A8Q9BY19 250 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ARL6Q9H0F7 186 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 MRPL18Q9H0U6 180 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ARRDC1-AS1Q9H2J1 176 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 TXNIPQ9H3M7 391 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 REEP4Q9H6H4 257 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 GPR35Q9HC97 309 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC22A11Q9NSA0 550 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC9A2Q9UBY0 812 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 PSORS1C1Q9UIG5 152 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC35A3Q9Y2D2 325 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 RBM8AQ9Y5S9 174 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 A0A1W2PS29 197 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 C20orf202A1L168 122 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 IGSF23A1L1A6 192 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 FGF16O43320 207 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SSNA1O43805 119 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 TNFSF15O95150 251 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 HLA-HP01893 362 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 RLN2P04090 185 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 HGFP14210 728 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 HIST1H1BP16401 226 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 GPX2P18283 190 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 MAKP20794 623 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 GCSHP23434 173 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 FPR2P25090 351 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 CASP1P29466 404 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 HTR1FP30939 366 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 CCKARP32238 428 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 LGALS7P47929 136 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 CKS1BP61024 79 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 PPP3R1P63098 170 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 PRR5P85299 388 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 GTF2H2Q13888 395 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 FASTKQ14296 549 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SURF2Q15527 256 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 NSDHLQ15738 373 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 TAF9Q16594 264 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF385BQ569K4 471 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SPIN4Q56A73 249 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 LY6G6FQ5SQ64 297 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ANKRD54Q6NXT1 300 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 GTF2H2CQ6P1K8 395 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 BAIAP2L2Q6UXY1 529 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 TMEM184AQ6ZMB5 413 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF841Q6ZN19 808 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 LINC00299Q6ZSB3 139 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 AMIGO1Q86WK6 493 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 GPSM1Q86YR5 675 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SMIM20Q8N5G0 67 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 JAGN1Q8N5M9 183 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR4P4Q8NGL7 312 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR6K2Q8NGY2 324 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR1P1Q8NH06 330 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 TERB2Q8NHR7 220 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ZFP90Q8TF47 636 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 RNF141Q8WVD5 230 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 RPEQ96AT9 228 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 FLYWCH2Q96CP2 140 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF354BQ96LW1 612 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF582Q96NG8 517 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF184Q99676 751 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 TIMP4Q99727 224 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC6A7Q99884 636 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 CDCA4Q9BXL8 241 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 C11orf54Q9H0W9 315 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 NLKQ9UBE8 527 aa5.41□□□□□ -1.54
SMARCE1-208ENST00000474246 OR5H14A6NHG9 310 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 LRRC3CA6NJW4 275 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 NPIPB11E5RHQ5 1161 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 H3BSA7 217 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 M0R143 59 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 DUSP11O75319 330 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 CD74P04233 296 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 ALDOBP05062 364 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 ARG1P05089 322 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 RHOCP08134 193 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 RAB6AP20340 208 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 TAS2R38P59533 333 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 MRPS34P82930 218 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 SEMA3BQ13214 749 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 CTU2Q2VPK5 515 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 ZFP69Q49AA0 526 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF585BQ52M93 769 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 RSBN1Q5VWQ0 802 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 VASNQ6EMK4 673 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 FAM71E1Q6IPT2 247 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 UNQ9370/PRO34162Q6UXP9 181 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 CEACAM20Q6UY09 585 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 OR2W3Q7Z3T1 314 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 MUC20Q8N307 709 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 ST6GALNAC3Q8NDV1 305 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 RAB8BQ92930 207 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms