RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 NAT2P11245 290 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ANXA8P13928 327 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF3P17036 446 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 PRKACGP22612 351 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 PYCR1P32322 319 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 DBPQ10586 325 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-203ENST00000474047 CORO6Q6QEF8 472 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 SLC37A3Q8NCC5 494 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 OR9Q1Q8NGQ5 310 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 OR4Q3Q8NH05 313 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 SLC25A40Q8TBP6 338 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 C10orf105Q8TEF2 133 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 UBASH3BQ8TF42 649 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 SLCO4A1Q96BD0 722 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 TEX12Q9BXU0 123 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 OR2J1Q9GZK6 312 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
VAMP4-203ENST00000474047 PLSCR5A0PG75 271 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 OR6C6A6NF89 314 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
VAMP4-203ENST00000474047 CCDC92Q53HC0 331 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-203ENST00000474047 ELFN2Q5R3F8 820 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 LINC00346Q8IVM7 164 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 HS3ST5Q8IZT8 346 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 OR51L1Q8NGJ5 315 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 SLC7A6Q92536 515 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 PITX2Q99697 317 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 LHFPL6Q9Y693 200 aa12.19□□□□□ -0.46
VAMP4-203ENST00000474047 EBAG9O00559 213 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 NGFP01138 241 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 TFP02787 698 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 PAICSP22234 425 aaKnown RBP12.18□□□□□ -0.46
VAMP4-203ENST00000474047 GRK5P34947 590 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 CRMP1Q14194 572 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 GGTLC2Q14390 218 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 SLC27A4Q6P1M0 643 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 IQCF1Q8N6M8 205 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-203ENST00000474047 MARS2Q96GW9 593 aaKnown RBP12.18□□□□□ -0.46
VAMP4-203ENST00000474047 COG8Q96MW5 612 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 TBCCD1Q9NVR7 557 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 KCNG2Q9UJ96 466 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 AP4S1Q9Y587 144 aa12.18□□□□□ -0.46
VAMP4-203ENST00000474047 IGLV3-9A0A075B6K5 115 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 TVP23AA6NH52 213 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 IGHV3-13P01766 116 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 OSMP13725 252 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 TUBG1P23258 451 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 FMO3P31513 532 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 GINS1Q14691 196 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 SHQ1Q6PI26 577 aaKnown RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 OR5L1Q8NGL2 311 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 OR6K6Q8NGW6 343 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 NRBF2Q96F24 287 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 PLEKHA8Q96JA3 519 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 DCLRE1CQ96SD1 692 aaKnown RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 TUBG2Q9NRH3 451 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 C17orf100A8MU93 164 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 H3BSA7 217 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 HMGN1P05114 100 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 GYPBP06028 91 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 FASP25445 335 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 MPV17P39210 176 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 NR4A2P43354 598 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 RGS6P49758 472 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 BLVRAP53004 296 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 SLC25A1P53007 311 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 PPP2R2BQ00005 443 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 ECH1Q13011 328 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 PCGF3Q3KNV8 242 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF362Q5T0B9 420 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 MBNL2Q5VZF2 373 aaKnown RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF786Q8N393 782 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 OR5K1Q8NHB7 308 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 IPCEF1Q8WWN9 437 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 DDOQ99489 341 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 COQ7Q99807 217 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 RBM4Q9BWF3 364 aaKnown RBP12.17□□□□□ -0.46
VAMP4-203ENST00000474047 CMC2Q9NRP2 79 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 CYSLTR2Q9NS75 346 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 ATPIF1Q9UII2 106 aa12.17□□□□□ -0.46
VAMP4-203ENST00000474047 MTORP42345 2549 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 ICMTO60725 284 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 DBHP09172 617 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 FCGR1AP12314 374 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 SPI1P17947 270 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 LIPAP38571 399 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF81P51508 661 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 CCL8P80075 99 aa12.16□□□□□ -0.46
VAMP4-203ENST00000474047 LOXL1Q08397 574 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-203ENST00000474047 ATP6AP1Q15904 470 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms