RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 VAMP1P23763 118 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 EFNB2P52799 333 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 SMCO1Q147U7 214 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 NKPD1Q17RQ9 610 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 PRTGQ2VWP7 1150 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 HFEQ30201 348 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 TMEM128Q5BJH2 165 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 H3F3CQ6NXT2 135 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 MED25Q71SY5 747 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 MDGA2Q7Z553 956 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR4N2Q8NGD1 307 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR5AP2Q8NGF4 316 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 ZNF296Q8WUU4 475 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 LMF1Q96S06 567 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 TINAGL1Q9GZM7 467 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 TAS2R4Q9NYW5 299 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 KCNG2Q9UJ96 466 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OTOL1A6NHN0 477 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 M0QYG6 137 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 FADS1O60427 444 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 SLC6A9P48067 706 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 PGDP52209 483 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 PRSS54Q6PEW0 395 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 FJX1Q86VR8 437 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 CHST4Q8NCG5 386 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR10H5Q8NGA6 315 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR5D14Q8NGL3 314 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR1S2Q8NGQ3 325 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR4C3Q8NH37 302 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 GPBAR1Q8TDU6 330 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 MOGAT1Q96PD6 335 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 TSSK2Q96PF2 358 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 CDCA3Q99618 268 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 FAM117AQ9C073 453 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 CHST6Q9GZX3 395 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 SMCO4Q9NRQ5 59 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 PISDQ9UG56 409 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 GDF2Q9UK05 429 aaPredicted RBP5.51□□□□□ -1.53
HERC4-209ENST00000473533 OR52A1Q9UKL2 312 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 SLC5A6Q9Y289 635 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 KPTNQ9Y664 436 aa5.51□□□□□ -1.53
HERC4-209ENST00000473533 MEIS3P1A6NDR6 274 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FAM74A7A6NL05 159 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 A8MVM7 634 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FOLR2P14207 255 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 HOXB2P14652 356 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 MST1P26927 711 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 MAGEB1P43366 347 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TAS2R46P59540 309 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 DCDP81605 110 aaKnown RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 SURF2Q15527 256 aaPredicted RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 SWI5Q1ZZU3 235 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ZNF260Q3ZCT1 412 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FAM74A3Q4VXF1 159 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FAM76BQ5HYJ3 339 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PRSS41Q7RTY9 318 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 C15orf54Q8N8G6 183 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ZNF615Q8N8J6 731 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 BMPERQ8N8U9 685 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PLPP7Q8NBV4 271 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 OR13C8Q8NGS7 320 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TSACCQ96A04 125 aaPredicted RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 ELSPBP1Q96BH3 223 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 C12orf57Q99622 126 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 SLC6A7Q99884 636 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 URM1Q9BTM9 101 aaKnown RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 PPP4R1LQ9P1A2 415 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 LOC107986453A0A1B0GWG9 222 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 C1orf196B1AJZ1 125 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 SLC16A7O60669 478 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 H2BFMP0C1H6 154 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ABOP16442 354 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 GDI1P31150 447 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ATP1B3P54709 279 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 DMWDQ09019 674 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PPP1R1AQ13522 171 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PEA15Q15121 130 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PPA1Q15181 289 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 LRRC37A5PQ49AS3 106 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 GXYLT1Q4G148 440 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FAM74A1Q5RGS3 127 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 VAX1Q5SQQ9 334 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TMEFF1Q8IYR6 380 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 OR10AC1Q8NH08 325 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 LILRB1Q8NHL6 650 aaPredicted RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 ZNF519Q8TB69 540 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 DOK4Q8TEW6 326 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 AQP10Q96PS8 301 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ABHD6Q9BV23 337 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TBL1XR1Q9BZK7 514 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ULBP3Q9BZM4 244 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 LRP12Q9Y561 859 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 CSAG2Q9Y5P2 127 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TRBV23OR9-2A0A075B6M9 112 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 A0A0A6YYC8 382 aaPredicted RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 IGLV1-36A0A0B4J1U3 117 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms