RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 COQ7Q99807 217 aa17.94■□□□□ 0.46
TOP3A-204ENST00000472959 TRAF4Q9BUZ4 470 aaPredicted RBP17.94■□□□□ 0.46
TOP3A-204ENST00000472959 BCL2L14Q9BZR8 327 aa17.94■□□□□ 0.46
TOP3A-204ENST00000472959 TOR3AQ9H497 397 aa17.94■□□□□ 0.46
TOP3A-204ENST00000472959 HEATR1Q9H583 2144 aaKnown RBP17.94■□□□□ 0.46
TOP3A-204ENST00000472959 CXorf56Q9H5V9 222 aa17.94■□□□□ 0.46
TOP3A-204ENST00000472959 H2AFY2Q9P0M6 372 aaPredicted RBP17.94■□□□□ 0.46
TOP3A-204ENST00000472959 ICMTO60725 284 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 OR4A8P0C604 315 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 BMP4P12644 408 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 RPS7P62081 194 aaKnown RBP17.93■□□□□ 0.46
TOP3A-204ENST00000472959 ADIPOQQ15848 244 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 DEFB113Q30KQ7 82 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 ZIK1Q3SY52 487 aaPredicted RBP17.93■□□□□ 0.46
TOP3A-204ENST00000472959 PACRGLQ8N7B6 248 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 BBS1Q8NFJ9 593 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 OR8J1Q8NGP2 316 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 TRUB1Q8WWH5 349 aaKnown RBP17.93■□□□□ 0.46
TOP3A-204ENST00000472959 IL4I1Q96RQ9 567 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 DCLRE1CQ96SD1 692 aaKnown RBP17.93■□□□□ 0.46
TOP3A-204ENST00000472959 PITX2Q99697 317 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 CMAHPQ9Y471 501 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 PLCE1Q9P212 2302 aa17.93■□□□□ 0.46
TOP3A-204ENST00000472959 RAI1Q7Z5J4 1906 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-204ENST00000472959 B9A039 149 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 E9PQ18 207 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 CD8AP01732 235 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 SPARCP09486 303 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 APOFQ13790 326 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 EFNB3Q15768 340 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 LCN1P1Q5VSP4 162 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 NXNL2Q5VZ03 156 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 CFAP77Q6ZQR2 320 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 SHFQ7M4L6 423 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 ERI1Q8IV48 349 aaKnown RBP17.92■□□□□ 0.46
TOP3A-204ENST00000472959 TIGD4Q8IY51 512 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 ZMYND19Q96E35 227 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-204ENST00000472959 MAP6Q96JE9 813 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 C4orf45Q96LM5 186 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 MBOAT4Q96T53 435 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 TEAD3Q99594 435 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 ELOVL3Q9HB03 270 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 IMPAD1Q9NX62 359 aa17.92■□□□□ 0.46
TOP3A-204ENST00000472959 FBXO9Q9UK97 447 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-204ENST00000472959 H0YHG0 523 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 M0R129 80 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 OVOL3O00110 214 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 CASQ2O14958 399 aaPredicted RBP17.91■□□□□ 0.46
TOP3A-204ENST00000472959 SMPD2O60906 423 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 FAM157BP0CG42 384 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 PAX1P15863 534 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 WNT5AP41221 380 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 AADACL4Q5VUY2 407 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 TMEM154Q6P9G4 183 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 DCXRQ7Z4W1 244 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 GID4Q8IVV7 300 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 ATF6BQ99941 703 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 FOXC2Q99958 501 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 PNRC2Q9NPJ4 139 aaKnown RBP17.91■□□□□ 0.46
TOP3A-204ENST00000472959 TBCCD1Q9NVR7 557 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 SMPD3Q9NY59 655 aaPredicted RBP17.91■□□□□ 0.46
TOP3A-204ENST00000472959 PDZD2O15018 2839 aa17.91■□□□□ 0.46
TOP3A-204ENST00000472959 ANKRD17O75179 2603 aaKnown RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 SLC22A31A6NKX4 558 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 GPRIN2O60269 458 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 LCKP06239 509 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 TUBG1P23258 451 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 PEX2P28328 305 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 RPS27P42677 84 aaKnown RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 EVX1P49640 407 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 LRRC36Q1X8D7 754 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 SWI5Q1ZZU3 235 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 MST1LQ2TV78 715 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 LPCAT4Q643R3 524 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 C11orf71Q6IPW1 123 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 RGS7BPQ6MZT1 257 aaPredicted RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 MEPCEQ7L2J0 689 aaKnown RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 ZNF771Q7L3S4 317 aaPredicted RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 DPY19L4Q7Z388 723 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 LURAP1LQ8IV03 231 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 GALNT4Q8N4A0 578 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 ZNF454Q8N9F8 522 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 OR6N2Q8NGY6 317 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 FAM81AQ8TBF8 368 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 MRPL24Q96A35 216 aaKnown RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 PLK3Q9H4B4 646 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 TUBG2Q9NRH3 451 aa17.9■□□□□ 0.46
TOP3A-204ENST00000472959 DDX28Q9NUL7 540 aaKnown RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 ZNF701Q9NV72 531 aaPredicted RBP17.9■□□□□ 0.46
TOP3A-204ENST00000472959 CCDC182A6NF36 153 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 J3QW42 95 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 ABHD16AO95870 558 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 PSKH1P11801 424 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 RGS6P49758 472 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 SNRPD2P62316 118 aaKnown RBP17.89■□□□□ 0.45
TOP3A-204ENST00000472959 SLC34A1Q06495 639 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 KRTAP27-1Q3LI81 207 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 OGFRL1Q5TC84 451 aaPredicted RBP17.89■□□□□ 0.45
TOP3A-204ENST00000472959 RHOUQ7L0Q8 258 aa17.89■□□□□ 0.45
TOP3A-204ENST00000472959 ZNF101Q8IZC7 436 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms