RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CCDC182A6NF36 153 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 J3QW42 95 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 SPARCP09486 303 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 TUBG1P23258 451 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 HTR1FP30939 366 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 GLRXP35754 106 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 RAD52P43351 418 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 HTR5AP47898 357 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 NUDT6P53370 316 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 NKX6-1P78426 367 aaPredicted RBP17.28■□□□□ 0.36
SF1-213ENST00000472725 DBPQ10586 325 aaPredicted RBP17.28■□□□□ 0.36
SF1-213ENST00000472725 LYPD4Q6UWN0 246 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 SLC16A9Q7RTY1 509 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 SETD9Q8NE22 299 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 OR6N2Q8NGY6 317 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 LURAP1Q96LR2 239 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 BCL2L14Q9BZR8 327 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 YIPF3Q9GZM5 350 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 TUBG2Q9NRH3 451 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 DDX28Q9NUL7 540 aaKnown RBP17.28■□□□□ 0.36
SF1-213ENST00000472725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.28■□□□□ 0.36
SF1-213ENST00000472725 TMEM14AQ9Y6G1 99 aa17.28■□□□□ 0.36
SF1-213ENST00000472725 CELSR2Q9HCU4 2923 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 LOC100509620A0A075B734 347 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 C5orf49A4QMS7 147 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 E7EQL1 145 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 M0R129 80 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 APOBEC3AP31941 199 aaPredicted RBP17.27■□□□□ 0.36
SF1-213ENST00000472725 KRTAP10-9P60411 292 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 ADARB1P78563 741 aaKnown RBP17.27■□□□□ 0.36
SF1-213ENST00000472725 HGFACQ04756 655 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 CORO6Q6QEF8 472 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 CFAP77Q6ZQR2 320 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 DPY19L4Q7Z388 723 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 DCXRQ7Z4W1 244 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 LINC00346Q8IVM7 164 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 RHOXF1Q8NHV9 184 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 OTOSQ8NHW6 89 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 NINJ1Q92982 152 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 ZNF582Q96NG8 517 aaPredicted RBP17.27■□□□□ 0.36
SF1-213ENST00000472725 ATF6BQ99941 703 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 ADI1Q9BV57 179 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 UBTD1Q9HAC8 227 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 ELOVL3Q9HB03 270 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 CA10Q9NS85 328 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 TBCCD1Q9NVR7 557 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 FBXO9Q9UK97 447 aaPredicted RBP17.27■□□□□ 0.36
SF1-213ENST00000472725 HSPE1-MOB4S4R3N1 261 aa17.27■□□□□ 0.36
SF1-213ENST00000472725 FLNBO75369 2602 aaKnown RBP17.27■□□□□ 0.35
SF1-213ENST00000472725 GABRB1P18505 474 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 CAPGP40121 348 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 RGS6P49758 472 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 UCP2P55851 309 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 KRTAP27-1Q3LI81 207 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 ZNF691Q5VV52 312 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 OTPQ5XKR4 325 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 PAMR1Q6UXH9 720 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 ENTHD1Q8IYW4 607 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 ST7LQ8TDW4 575 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 NRG4Q8WWG1 115 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 MAP6Q96JE9 813 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 COG8Q96MW5 612 aa17.26■□□□□ 0.35
SF1-213ENST00000472725 CNN2Q99439 309 aaKnown RBP17.26■□□□□ 0.35
SF1-213ENST00000472725 PNRC2Q9NPJ4 139 aaKnown RBP17.26■□□□□ 0.35
SF1-213ENST00000472725 PLCE1Q9P212 2302 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 ZNF878C9JN71 531 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 RAF1P04049 648 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 TTKP33981 857 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 SLC15A1P46059 708 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 SNTB2Q13425 540 aaKnown RBP17.25■□□□□ 0.35
SF1-213ENST00000472725 EIF2B1Q14232 305 aaKnown RBP17.25■□□□□ 0.35
SF1-213ENST00000472725 AGAP6Q5VW22 663 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 B3GLCTQ6Y288 498 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 FBXL14Q8N1E6 418 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 SMAP2Q8WU79 429 aaPredicted RBP17.25■□□□□ 0.35
SF1-213ENST00000472725 CYGBQ8WWM9 190 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 NEUROG1Q92886 237 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 PIGTQ969N2 578 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 SPTSSAQ969W0 71 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 C4orf45Q96LM5 186 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 CLN6Q9NWW5 311 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 DCHS2Q6V1P9 2916 aa17.25■□□□□ 0.35
SF1-213ENST00000472725 H3BSA7 217 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 PHYHO14832 338 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 SELENOFO60613 162 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 APOC1P02654 83 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 LYNP07948 512 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 DANCRP0C864 163 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 CCL2P13500 99 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 ALOX5APP20292 161 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 CCNOP22674 350 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 OTX1P32242 354 aaPredicted RBP17.24■□□□□ 0.35
SF1-213ENST00000472725 EVX1P49640 407 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 FABP6P51161 128 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 GRB2P62993 217 aaKnown RBP17.24■□□□□ 0.35
SF1-213ENST00000472725 KRT80Q6KB66 452 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 BCDIN3DQ7Z5W3 292 aaKnown RBP17.24■□□□□ 0.35
SF1-213ENST00000472725 DTX2Q86UW9 622 aa17.24■□□□□ 0.35
SF1-213ENST00000472725 PAQR4Q8N4S7 273 aaPredicted RBP17.24■□□□□ 0.35
SF1-213ENST00000472725 TMEM171Q8WVE6 324 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms