RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 EDA2RQ9HAV5 297 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 UXTQ9UBK9 157 aaPredicted RBP2.94□□□□□ -1.94
CLK1-209ENST00000472679 VANGL2Q9ULK5 521 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 IGLV3-12A0A075B6K2 115 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 SOCS1O15524 211 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 HLA-DQA1P01909 254 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 C1GALT1C1LP0DN25 315 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 GGT1P19440 569 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 CXCL12P48061 93 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 PITPNAQ00169 270 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 DNLZQ5SXM8 178 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 PRAMEF20Q5VT98 475 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 ZFP1Q6P2D0 407 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 MBOAT1Q6ZNC8 495 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 TMEM150AQ86TG1 271 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 CDKL3Q8IVW4 592 aaPredicted RBP2.93□□□□□ -1.94
CLK1-209ENST00000472679 WDFY1Q8IWB7 410 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 LINC01560Q8TB33 94 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 LRRC29Q8WV35 223 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 ELMO1Q92556 727 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 DOK1Q99704 481 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 MICU1Q9BPX6 476 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 TIMM29Q9BSF4 260 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 NUP58Q9BVL2 599 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 SLC38A10Q9HBR0 1119 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 HRASLS2Q9NWW9 162 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 LGALS13Q9UHV8 139 aa2.93□□□□□ -1.94
CLK1-209ENST00000472679 IGHV1OR15-9A0A0B4J2B8 117 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 C5orf63A6NC05 138 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 ZNF850A8MQ14 1090 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 A8MUU9 505 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 RNF13O43567 381 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 FKBP6O75344 327 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 RDH16O75452 317 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 OR8U9P0C7N5 309 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 HCAR3P49019 387 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 GPR107Q5VW38 600 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 TAS2R42Q7RTR8 314 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 SLC16A13Q7RTY0 426 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 CMTM1Q8IZ96 169 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 IQCKQ8N0W5 287 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 PTX4Q96A99 478 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 DNAJC1Q96KC8 554 aaKnown RBP2.92□□□□□ -1.94
CLK1-209ENST00000472679 COL21A1Q96P44 957 aa2.92□□□□□ -1.94
CLK1-209ENST00000472679 TRMT112Q9UI30 125 aaKnown RBP2.92□□□□□ -1.94
CLK1-209ENST00000472679 GOLGA8OA6NCC3 632 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 FAM47DPA6NHR8 397 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 GOLGA8NF8WBI6 632 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 H0YJW9 148 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 SMKR1H3BMG3 65 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 EIF3HO15372 352 aaKnown RBP eCLIP2.91□□□□□ -1.94
CLK1-209ENST00000472679 TROVE2P10155 538 aaKnown RBP eCLIP2.91□□□□□ -1.94
CLK1-209ENST00000472679 RAB3AP20336 220 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 PBLDP30039 288 aaPredicted RBP2.91□□□□□ -1.94
CLK1-209ENST00000472679 TNNT2P45379 298 aaPredicted RBP2.91□□□□□ -1.94
CLK1-209ENST00000472679 P2RX1P51575 399 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 VSX2P58304 361 aaPredicted RBP2.91□□□□□ -1.94
CLK1-209ENST00000472679 STXBP1P61764 594 aaKnown RBP2.91□□□□□ -1.94
CLK1-209ENST00000472679 PPP1CBP62140 327 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 SELENBP1Q13228 472 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 AVPI1Q5T686 147 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 KPRPQ5T749 579 aaPredicted RBP2.91□□□□□ -1.94
CLK1-209ENST00000472679 PRR9Q5T870 116 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 C9orf135Q5VTT2 229 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 REEP3Q6NUK4 255 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 CDH26Q8IXH8 852 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 GTPBP8Q8N3Z3 284 aaPredicted RBP2.91□□□□□ -1.94
CLK1-209ENST00000472679 NPWQ8N729 165 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 RAB3IL1Q8TBN0 382 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 EEF1AKMT3Q96AZ1 226 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 RASD2Q96D21 266 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 RNF157Q96PX1 679 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 S4R3C0 116 aa2.91□□□□□ -1.94
CLK1-209ENST00000472679 OR6C74A6NCV1 312 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 OR2AG2A6NM03 316 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 DNASE2O00115 360 aaPredicted RBP2.9□□□□□ -1.95
CLK1-209ENST00000472679 H6PDO95479 791 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 SERPINE2P07093 398 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 CTSLP07711 333 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 ATF6P18850 670 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 SLC1A1P43005 524 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 CDKN2DP55273 166 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 PRR3P79522 188 aaKnown RBP2.9□□□□□ -1.95
CLK1-209ENST00000472679 QPRTQ15274 297 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 SLC16A14Q7RTX9 510 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 COX18Q8N8Q8 333 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 NUBPLQ8TB37 319 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 FGF23Q9GZV9 251 aaPredicted RBP2.9□□□□□ -1.95
CLK1-209ENST00000472679 PITPNC1Q9UKF7 332 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 SIGLEC9Q9Y336 463 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 HYOU1Q9Y4L1 999 aa2.9□□□□□ -1.95
CLK1-209ENST00000472679 ANKRD12Q6UB98 2062 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 A0A1B0GW55 424 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 LYRM9A8MSI8 78 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 H7C417 338 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 K7EMT4 169 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 CLDN11O75508 207 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 REM1O75628 298 aa2.89□□□□□ -1.95
CLK1-209ENST00000472679 SNX4O95219 450 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms