RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 SOCS2O14508 198 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 CDC42EP2O14613 210 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 MPZL2O60487 215 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 RAMP1O60894 148 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ATP6V1G1O75348 118 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 UPK3AO75631 287 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 RAD51DO75771 328 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 LYZL6O75951 148 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ZNF432O94892 652 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PRSS23O95084 383 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 UBL3O95164 117 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 LYPD3O95274 346 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PPP1R3DO95685 299 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 TXNDC12O95881 172 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 HPRP00739 348 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 APOC1P02654 83 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SEMG1P04279 462 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 AMY1AP04745 511 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DUX4L2P0CJ85 424 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DUX4L3P0CJ86 424 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DUX4L4P0CJ87 422 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DUX4L5P0CJ88 424 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DUX4L6P0CJ89 424 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DUX4L7P0CJ90 424 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 HLA-DOBP13765 273 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ANPEPP15144 967 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 CBR1P16152 277 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ZNF3P17036 446 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PSMB1P20618 241 aaKnown RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 C4BPBP20851 252 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 CCNOP22674 350 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 IGHV1-2P23083 117 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 IGFBP5P24593 272 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PTAFRP25105 342 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 GRK5P34947 590 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 APLNRP35414 380 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 UGT2B10P36537 528 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 RAD52P43351 418 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SLC15A1P46059 708 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ZNF83P51522 516 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 NANOS3P60323 173 aaKnown RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 ELF3P78545 371 aaPredicted RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 GALK2Q01415 458 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 GLO1Q04760 184 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SLC34A1Q06495 639 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PIGFQ07326 219 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.47□□□□□ -2.01
DMD-219ENST00000471779 NPRL3Q12980 569 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 MED21Q13503 144 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DCTN2Q13561 401 aaKnown RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 BLMHQ13867 455 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 CCNIQ14094 377 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DAG1Q14118 895 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 MELKQ14680 651 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DAZAP2Q15038 168 aaPredicted RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 PTGES3Q15185 160 aaKnown RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 SEC23BQ15437 767 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 TRIP10Q15642 601 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 GSG1Q2KHT4 349 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ZIK1Q3SY52 487 aaPredicted RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 FBXL19-AS1Q494R0 122 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 IQCCQ4KMZ1 466 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 KLHL12Q53G59 568 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 KLHL22Q53GT1 634 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 CLEC12AQ5QGZ9 265 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 FAM27BQ5VT28 67 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ABLIM2Q6H8Q1 611 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SLC27A4Q6P1M0 643 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 LEG1Q6P5S2 330 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SLC22A25Q6T423 547 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 C16orf54Q6UWD8 224 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 TFAP2EQ6VUC0 442 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 WDR88Q6ZMY6 472 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PTCHD4Q6ZW05 846 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SHFQ7M4L6 423 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SLC46A3Q7Z3Q1 461 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 TSEN54Q7Z6J9 526 aaKnown RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 IGFN1Q86VF2 1251 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 COMTD1Q86VU5 262 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 TMEM200AQ86VY9 491 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 MEX3DQ86XN8 651 aaKnown RBP2.47□□□□□ -2.01
DMD-219ENST00000471779 C1orf174Q8IYL3 243 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 LRRC18Q8N456 261 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 GALNT4Q8N4A0 578 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 C17orf78Q8N4C9 275 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 SLC22A24Q8N4F4 322 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 DHRSXQ8N5I4 330 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 CLDN22Q8N7P3 220 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 NAXEQ8NCW5 288 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 PROKR2Q8NFJ6 384 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 GJC3Q8NFK1 279 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 OR4F15Q8NGB8 312 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 OR9Q2Q8NGE9 314 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 OR5L1Q8NGL2 311 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 OR1K1Q8NGR3 316 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 OR13C2Q8NGS9 318 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 OR52N5Q8NH56 324 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 ANGPTL6Q8NI99 470 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 FANK1Q8TC84 345 aa2.47□□□□□ -2.01
DMD-219ENST00000471779 TRUB1Q8WWH5 349 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms