RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 C7orf69Q9H7B7 122 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 SRA1Q9HD15 236 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 NRIP3Q9NQ35 241 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 PTTG3PQ9NZH4 202 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 ASH2LQ9UBL3 628 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 EIF3KQ9UBQ5 218 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 GRHPRQ9UBQ7 328 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 PURGQ9UJV8 347 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 LHFPL6Q9Y693 200 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 IGLV1-36A0A0B4J1U3 117 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 TRAV20A0A0B4J274 112 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 OR6C68A6NDL8 312 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 UNC119BA6NIH7 251 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 CLDN25C9JDP6 229 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 MLNRO43193 412 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 SGCEO43556 437 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 TIMM8AO60220 97 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 DOK2O60496 412 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 PPP1R3DO95685 299 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 ABHD16AO95870 558 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 CYB5R3P00387 301 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 SEMG1P04279 462 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HLA-DPB1P04440 258 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 ADH4P08319 380 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 CD80P33681 288 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HTR5AP47898 357 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HIST1H3AP68431 136 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 TNFAIP6P98066 277 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 KRR1Q13601 381 aaKnown RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 TAF11Q15544 211 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 MAPRE2Q15555 327 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 MTX3Q5HYI7 312 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 FGD3Q5JSP0 725 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HIST2H3PS2Q5TEC6 136 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HIST2H3AQ71DI3 136 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 C1QL2Q7Z5L3 287 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 LINC00346Q8IVM7 164 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 RNF113BQ8IZP6 322 aaKnown RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 OR6V1Q8N148 313 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 OR4K13Q8NH42 304 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 OR1F12Q8NHA8 337 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 LZICQ8WZA0 190 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 FAM162AQ96A26 154 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HAVCR1Q96D42 359 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 ELMOD3Q96FG2 381 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 RSRC1Q96IZ7 334 aaKnown RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 SAMD8Q96LT4 415 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 ZNF570Q96NI8 536 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 NMNAT3Q96T66 252 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 GAL3ST1Q99999 423 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 HOPXQ9BPY8 73 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 KCTD14Q9BQ13 255 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 FAM107BQ9H098 131 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 EFCAB1Q9HAE3 211 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 TMEM165Q9HC07 324 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 TMEM106BQ9NUM4 274 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 DCAF13Q9NV06 445 aaKnown RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 ARL8BQ9NVJ2 186 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 ARGLU1Q9NWB6 273 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 VSX1Q9NZR4 365 aaPredicted RBP6.79□□□□□ -1.32
USP48-207ENST00000471752 ABCD2Q9UBJ2 740 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 ZNF69Q9UC07 566 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 PCDHB10Q9UN67 800 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 B9D1Q9UPM9 204 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 PPIAL4AQ9Y536 164 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 NPTNQ9Y639 398 aa6.79□□□□□ -1.32
USP48-207ENST00000471752 A0A1W2PRQ8 180 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 PLSCR5A0PG75 271 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 A6NIZ1 184 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 C12orf71A8MTZ7 269 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 F5H5P2 479 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 KHDRBS3O75525 346 aaKnown RBP6.78□□□□□ -1.32
USP48-207ENST00000471752 FCN3O75636 299 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 TXNDC12O95881 172 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 H1F0P07305 194 aaKnown RBP6.78□□□□□ -1.32
USP48-207ENST00000471752 CD55P08174 381 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 IGHV4-38-2P0DP08 117 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 HIST1H1CP16403 213 aaKnown RBP6.78□□□□□ -1.32
USP48-207ENST00000471752 KITLGP21583 273 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 SLC6A9P48067 706 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 CENPAP49450 140 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 HILS1P60008 231 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 RAP1BP61224 184 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 PCBD1P61457 104 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 RAP1AP62834 184 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 ELF3P78545 371 aaPredicted RBP6.78□□□□□ -1.32
USP48-207ENST00000471752 PAX2Q02962 417 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 DGCR6Q14129 220 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 TUSC1Q2TAM9 212 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 FAM209AQ5JX71 171 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 SLC35F1Q5T1Q4 408 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 DCAF12L2Q5VW00 463 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 LYPD2Q6UXB3 125 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 CFAP77Q6ZQR2 320 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 HDDC2Q7Z4H3 204 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 LRRC28Q86X40 367 aaPredicted RBP6.78□□□□□ -1.32
USP48-207ENST00000471752 ALDH16A1Q8IZ83 802 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 SIGLECL1Q8N7X8 197 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 BHLHE23Q8NDY6 225 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 OR10S1Q8NGN2 331 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms